BLASTX nr result

ID: Lithospermum22_contig00036384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036384
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29999.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3...   153   2e-35
ref|XP_002309295.1| tubulin gamma complex-associated protein [Po...   151   5e-35
ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   149   2e-34
ref|XP_003625292.1| Gamma-tubulin complex component [Medicago tr...   148   4e-34

>emb|CBI29999.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/88 (82%), Positives = 78/88 (88%)
 Frame = -1

Query: 264 TGDRGWDVFSLEYIATVPLNTVFTESVMSRYLKIFNFLWKLRRVEHALIGAWKMMKPNCI 85
           TGDRGWDVFSLEY A VPLNTVFTESVM+RYL+IFNFLWKLRRVEHALIGAWK MKPNCI
Sbjct: 500 TGDRGWDVFSLEYDARVPLNTVFTESVMARYLRIFNFLWKLRRVEHALIGAWKTMKPNCI 559

Query: 84  TSSVFNKLPDAVKSQLVLTSRKCQVLWD 1
           TS+ F KL  AVK QL+ T R+CQVLWD
Sbjct: 560 TSNSFIKLQSAVKLQLLSTLRRCQVLWD 587


>ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3 homolog [Vitis
           vinifera]
          Length = 854

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/88 (82%), Positives = 78/88 (88%)
 Frame = -1

Query: 264 TGDRGWDVFSLEYIATVPLNTVFTESVMSRYLKIFNFLWKLRRVEHALIGAWKMMKPNCI 85
           TGDRGWDVFSLEY A VPLNTVFTESVM+RYL+IFNFLWKLRRVEHALIGAWK MKPNCI
Sbjct: 577 TGDRGWDVFSLEYDARVPLNTVFTESVMARYLRIFNFLWKLRRVEHALIGAWKTMKPNCI 636

Query: 84  TSSVFNKLPDAVKSQLVLTSRKCQVLWD 1
           TS+ F KL  AVK QL+ T R+CQVLWD
Sbjct: 637 TSNSFIKLQSAVKLQLLSTLRRCQVLWD 664


>ref|XP_002309295.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222855271|gb|EEE92818.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 860

 Score =  151 bits (382), Expect = 5e-35
 Identities = 72/88 (81%), Positives = 78/88 (88%)
 Frame = -1

Query: 264 TGDRGWDVFSLEYIATVPLNTVFTESVMSRYLKIFNFLWKLRRVEHALIGAWKMMKPNCI 85
           TGDRGWDVFSLEY A VPL+TVFTESVM+RYL+IFNFLWKLRRVEHALIGAWK MKPNCI
Sbjct: 583 TGDRGWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLRRVEHALIGAWKTMKPNCI 642

Query: 84  TSSVFNKLPDAVKSQLVLTSRKCQVLWD 1
           TS  F KL DAVK QL+ T R+CQVLW+
Sbjct: 643 TSHSFTKLQDAVKLQLLSTLRQCQVLWN 670


>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223527963|gb|EEF30048.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 855

 Score =  149 bits (376), Expect = 2e-34
 Identities = 71/88 (80%), Positives = 77/88 (87%)
 Frame = -1

Query: 264 TGDRGWDVFSLEYIATVPLNTVFTESVMSRYLKIFNFLWKLRRVEHALIGAWKMMKPNCI 85
           TGDRGWDVFSLEY A VPL+TVFT+SVM+RYL+IFNFLWKLRRVEHALIGAWK MKPNCI
Sbjct: 578 TGDRGWDVFSLEYDARVPLDTVFTKSVMARYLRIFNFLWKLRRVEHALIGAWKTMKPNCI 637

Query: 84  TSSVFNKLPDAVKSQLVLTSRKCQVLWD 1
           TS  F KL  AVK QL+ T R+CQVLWD
Sbjct: 638 TSHAFIKLQGAVKLQLLSTLRRCQVLWD 665


>ref|XP_003625292.1| Gamma-tubulin complex component [Medicago truncatula]
           gi|355500307|gb|AES81510.1| Gamma-tubulin complex
           component [Medicago truncatula]
          Length = 841

 Score =  148 bits (374), Expect = 4e-34
 Identities = 69/87 (79%), Positives = 77/87 (88%)
 Frame = -1

Query: 264 TGDRGWDVFSLEYIATVPLNTVFTESVMSRYLKIFNFLWKLRRVEHALIGAWKMMKPNCI 85
           +GDRGWDVFSLEY A VPL+TVFTESVM+RYL+IFNFLWKL+RVEHALIGAWK MKPNCI
Sbjct: 566 SGDRGWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLKRVEHALIGAWKTMKPNCI 625

Query: 84  TSSVFNKLPDAVKSQLVLTSRKCQVLW 4
           TS+ FN+L  AVK QLV   R+CQVLW
Sbjct: 626 TSNTFNRLQHAVKMQLVSALRRCQVLW 652


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