BLASTX nr result

ID: Lithospermum22_contig00036304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036304
         (1184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   161   3e-37
ref|XP_004134365.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   152   2e-34
ref|XP_003626798.1| RING finger protein [Medicago truncatula] gi...   140   8e-31
ref|XP_003595366.1| RING-H2 finger protein ATL3J [Medicago trunc...   140   8e-31
ref|XP_002526497.1| ring finger protein, putative [Ricinus commu...   139   2e-30

>ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Vitis vinifera]
          Length = 342

 Score =  161 bits (408), Expect = 3e-37
 Identities = 115/299 (38%), Positives = 150/299 (50%), Gaps = 23/299 (7%)
 Frame = -1

Query: 902 YILLRFLSRR------SNPSHAPPHNSTLQNHXXXXXXXXXXXXXXXSDNTVLLDSLPLL 741
           Y+LLR+LSRR      S+    PP +S  +                  ++  L+DSLPL 
Sbjct: 58  YLLLRYLSRRCSERLHSDDVVLPPVDSDRR----------FSSRRVSPEDLSLIDSLPLF 107

Query: 740 TFRSVNGNLTGK--DCAVCLSKFEKEDQLRLLPLCCHAFHSQCVDTWLLSNQSCPLCRST 567
           TF SV G  +    DCAVCLSKFE  DQLRLLP+CCHAFH++C+DTWL SNQ+CPLCRS 
Sbjct: 108 TFGSVRGRNSSSEGDCAVCLSKFEPHDQLRLLPICCHAFHARCIDTWLASNQTCPLCRSP 167

Query: 566 VNPTDADVMNKVISLTENVXXXXXXXXXXSFGVETSHNGRARRSQSEGSFEYNVDDNHEI 387
           +  T+AD M  +++ T             S     S +G ARRS S GSF+Y VD   E+
Sbjct: 168 IFATEADFMKAILASTNAGDSFRIELGSVSRRRSASESGEARRSYSVGSFDYIVDHESEV 227

Query: 386 P---SDFRG-----VPDVDKDTA----NINVIDPPGVRLDNTEIGASQRNWLRDYVEXXX 243
               +  RG       + DKD A    N    +PPG      E+ AS R+WL+DYV+   
Sbjct: 228 TVASTHRRGGSESSAAEKDKDDAGAQSNQLAPEPPGPSTA-AEV-ASGRSWLKDYVDRLS 285

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXR---NDAVVPVDEDLEASNSRAGEDISELFRWISGV 75
                                      N+     + DLEA+  R GE+ISE+FRW SG+
Sbjct: 286 STASLSISSRALSFRSSGRFFTGSSRRNETASVGEWDLEAN--RVGEEISEMFRWFSGI 342


>ref|XP_004134365.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Cucumis sativus]
           gi|449487638|ref|XP_004157726.1| PREDICTED: E3
           ubiquitin-protein ligase ATL4-like [Cucumis sativus]
          Length = 339

 Score =  152 bits (383), Expect = 2e-34
 Identities = 97/238 (40%), Positives = 125/238 (52%), Gaps = 9/238 (3%)
 Frame = -1

Query: 761 LDSLPLLTFRSVN--GNLTGKDCAVCLSKFEKEDQLRLLPLCCHAFHSQCVDTWLLSNQS 588
           ++SLPL +F SV    +    DCAVCLSKFE EDQLRLLPLCCHAFH+QCVDTWL SNQS
Sbjct: 108 IESLPLFSFSSVTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQS 167

Query: 587 CPLCRSTVNPTDADVMNKVISLTENVXXXXXXXXXXSFGVE----TSHNGRARRSQSEGS 420
           CPLCRS +  +++DVM   ++                  +      S +   RRS S GS
Sbjct: 168 CPLCRSAIFASESDVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGS 227

Query: 419 FEYNVDDNHEI---PSDFRGVPDVDKDTANINVIDPPGVRLDNTEIGASQRNWLRDYVEX 249
           FEY V+++ E+    +  R V D +   A I+ +     R    E+G S RNWL+DYV+ 
Sbjct: 228 FEYFVEEDSEVNFTNAHRRSVSDKEDIEAPISAVSTE--RSLAAEVG-SGRNWLKDYVD- 283

Query: 248 XXXXXXXXXXXXXXXXXXXXXXXXXRNDAVVPVDEDLEASNSRAGEDISELFRWISGV 75
                                       + V V  + E  N+R GE+ISELFRW SGV
Sbjct: 284 --RLSNSVSSRALSFRGSGRFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV 339


>ref|XP_003626798.1| RING finger protein [Medicago truncatula]
           gi|355520820|gb|AET01274.1| RING finger protein
           [Medicago truncatula]
          Length = 316

 Score =  140 bits (352), Expect = 8e-31
 Identities = 92/242 (38%), Positives = 126/242 (52%), Gaps = 12/242 (4%)
 Frame = -1

Query: 764 LLDSLPLLTFRSVNGN---LTGKDCAVCLSKFEKEDQLRLLPLCCHAFHSQCVDTWLLSN 594
           ++DSLPL TF S++     +T  DCAVCLSKF   D LR LPLCCHAFH++C+DTWL SN
Sbjct: 81  VIDSLPLFTFSSISRRSSAVTAADCAVCLSKFRNSDLLRSLPLCCHAFHAECIDTWLRSN 140

Query: 593 QSCPLCRSTVNPTDADVMNKVISLTENVXXXXXXXXXXSFG-----VETSHNGRARRSQS 429
            SCPLCR+++ P+D+D + K++  T +             G      +    G   RS S
Sbjct: 141 LSCPLCRASILPSDSD-LAKILRSTSSDSFRVDIGNISRRGNNLPNPDAVTTGGDSRSYS 199

Query: 428 EGSFEYNVDDNHEI--PSDFRGVPDVDKDTANINVIDPPGVRLDNTEIG--ASQRNWLRD 261
            GSFEY V +  E+    D R      KD  +I V +   +  +NT  G  A   +WL+D
Sbjct: 200 IGSFEYYVVEPSEVSFTQDHRRSVSDQKD-IHIPVSEDSSMTHENTIAGEVAGSGHWLKD 258

Query: 260 YVEXXXXXXXXXXXXXXXXXXXXXXXXXXRNDAVVPVDEDLEASNSRAGEDISELFRWIS 81
           YV+                           +  + PVD D+E   +R GE+ISE+FRW+S
Sbjct: 259 YVD--RLSASISSRTASFRSSGRFFAGGGSSRRIEPVDYDVE--GNRIGEEISEMFRWLS 314

Query: 80  GV 75
           GV
Sbjct: 315 GV 316


>ref|XP_003595366.1| RING-H2 finger protein ATL3J [Medicago truncatula]
           gi|355484414|gb|AES65617.1| RING-H2 finger protein ATL3J
           [Medicago truncatula]
          Length = 298

 Score =  140 bits (352), Expect = 8e-31
 Identities = 89/247 (36%), Positives = 133/247 (53%), Gaps = 17/247 (6%)
 Frame = -1

Query: 764 LLDSLPLLTFRSV---NGNLTGKDCAVCLSKFEKEDQLRLLPLCCHAFHSQCVDTWLLSN 594
           ++DSLP+ TF S+   +  +   DCAVCLSKFE+ D LRLLPLCCHAFH++C+D WL SN
Sbjct: 59  VVDSLPIFTFSSIKRRSSTVVSGDCAVCLSKFEQNDLLRLLPLCCHAFHTECIDAWLSSN 118

Query: 593 QSCPLCRSTVNPTDADVMNKVISLTEN-------VXXXXXXXXXXSFGVETSHNGRA--- 444
           Q+CPLCRS+V  +++++M    S + +       +          +   + ++N  A   
Sbjct: 119 QTCPLCRSSVFASESEIMKIFRSSSTSSGNNSFRLEIGNISNRREATATDNNNNNVAGET 178

Query: 443 -RRSQSEGSFEYNVDDNHEIP--SDFRGVPDVDKDTANINVIDPPGVRLDNTEIGASQRN 273
            +R+ S G+FEY VD+  EIP  +  R +   +K+ A +  ++          +   + N
Sbjct: 179 DQRTYSVGAFEYFVDEEAEIPVGNTNRRIFSGEKEDAVVLAVEVETPVASQASL-IGEGN 237

Query: 272 WLRDYVEXXXXXXXXXXXXXXXXXXXXXXXXXXRNDAVVPV-DEDLEASNSRAGEDISEL 96
           WL+DYV+                          RND V  V D D+EA+ +  GE+ISE+
Sbjct: 238 WLKDYVD------GLTRVMSFRGSGRFFTGSGRRNDVVAGVGDFDVEANGNGFGEEISEM 291

Query: 95  FRWISGV 75
           FRWISGV
Sbjct: 292 FRWISGV 298


>ref|XP_002526497.1| ring finger protein, putative [Ricinus communis]
           gi|223534172|gb|EEF35888.1| ring finger protein,
           putative [Ricinus communis]
          Length = 354

 Score =  139 bits (349), Expect = 2e-30
 Identities = 88/237 (37%), Positives = 120/237 (50%), Gaps = 8/237 (3%)
 Frame = -1

Query: 764 LLDSLPLLTFRSVNGNLTGK--DCAVCLSKFEKEDQLRLLPLCCHAFHSQCVDTWLLSNQ 591
           ++DSLPL TF S+    T    DCAVCLSKFE +DQLRLLPLCCHAFH  C+DTWL SNQ
Sbjct: 96  IIDSLPLFTFSSIKRRSTSSSGDCAVCLSKFEPQDQLRLLPLCCHAFHIHCIDTWLHSNQ 155

Query: 590 SCPLCRSTVNPTDADVMNKVISLTENVXXXXXXXXXXSFGVETSHNGRARRSQSEGSFEY 411
           +CPLCRS ++ +D+D++    SL+ +                       R S S GSFEY
Sbjct: 156 TCPLCRSPIHASDSDLLK---SLSPDAAPPESFRLEIGSISRRQTASEPRSSYSVGSFEY 212

Query: 410 NVDDNHEI---PSDFRGVPDVDKDTANINVIDPPGVRLDN---TEIGASQRNWLRDYVEX 249
            VD++ E+    +  R V D +  T +         R D+   +++    R+WL+DYV+ 
Sbjct: 213 VVDEDSEVTMSQTHRRSVSDKEGGTHS---------RQDSNLASQVSGGGRSWLKDYVDR 263

Query: 248 XXXXXXXXXXXXXXXXXXXXXXXXXRNDAVVPVDEDLEASNSRAGEDISELFRWISG 78
                                            D D+EA  +R GE+I+E+FRW SG
Sbjct: 264 LSSSLSFRSSGRLFTGSSRRSEIGSLG------DYDVEA--NRVGEEITEMFRWFSG 312


Top