BLASTX nr result

ID: Lithospermum22_contig00036290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036290
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ21662.1| Skp1-like protein 1 [Prunus avium]                     102   4e-20
gb|ACP20181.1| SKP1-like protein [Citrus maxima]                      100   1e-19
gb|ABB77427.1| Skp1-like protein 2 [Petunia integrifolia subsp. ...   100   1e-19
ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumi...   100   2e-19
ref|XP_004146156.1| PREDICTED: SKP1-like protein 1B-like [Cucumi...    99   4e-19

>gb|AFJ21662.1| Skp1-like protein 1 [Prunus avium]
          Length = 156

 Score =  102 bits (253), Expect = 4e-20
 Identities = 56/148 (37%), Positives = 89/148 (60%), Gaps = 8/148 (5%)
 Frame = +3

Query: 12  TSEKKIGLKSSDGDIIIVDKAIAVQMXXXXXXXXXXXXXXXXXXXXXXYDFLFPV-SVKH 188
           +SE+KI LKSSDG+   VD+A+A++                        D   P+ +V  
Sbjct: 2   SSERKITLKSSDGETFEVDEAVALESQTIKHMVEDDCA-----------DNGIPLPNVTS 50

Query: 189 NVLCKVVDYCRKHAGA-------NDDDDLKTFDTNFVEVDRDMLLDLVLAANYLNIPSLM 347
            +L KV++YC+KH  A       ++D+DLK +DT+FV++D+  L DL+LAANYLNI SL+
Sbjct: 51  KILAKVIEYCKKHVDAAKPDDRPSNDEDLKAWDTDFVKIDQATLFDLILAANYLNIKSLL 110

Query: 348 ELTCKEIAGLVVHMNEDQVHEMFNIEND 431
           +LTC+ +A ++     +++ + FNI+ND
Sbjct: 111 DLTCQTVADMIKGKTPEEIRKTFNIKND 138


>gb|ACP20181.1| SKP1-like protein [Citrus maxima]
          Length = 158

 Score =  100 bits (249), Expect = 1e-19
 Identities = 57/150 (38%), Positives = 89/150 (59%), Gaps = 10/150 (6%)
 Frame = +3

Query: 12  TSEKKIGLKSSDGDIIIVDKAIAVQMXXXXXXXXXXXXXXXXXXXXXXYDFLFPV-SVKH 188
           +SEKKI LKSSDG+   V++ +A++                        D + P+ +V  
Sbjct: 2   SSEKKITLKSSDGETFEVEETVALESQTIKHTVEDDCA-----------DTVIPLPNVTS 50

Query: 189 NVLCKVVDYCRKH--AGANDD-------DDLKTFDTNFVEVDRDMLLDLVLAANYLNIPS 341
            +L KV++YC+KH  AG+ D        DDLKT+D +FV+VD++ L DL+LAANYLNI  
Sbjct: 51  TILSKVIEYCKKHVEAGSGDKKDDKSTVDDLKTWDADFVKVDQNTLFDLILAANYLNIKG 110

Query: 342 LMELTCKEIAGLVVHMNEDQVHEMFNIEND 431
           L++LTC+ +A ++     +++ + FNI+ND
Sbjct: 111 LLDLTCQTVADMIKGKTPEEIRKTFNIKND 140


>gb|ABB77427.1| Skp1-like protein 2 [Petunia integrifolia subsp. inflata]
          Length = 154

 Score =  100 bits (249), Expect = 1e-19
 Identities = 55/146 (37%), Positives = 87/146 (59%), Gaps = 7/146 (4%)
 Frame = +3

Query: 15  SEKKIGLKSSDGDIIIVDKAIAVQMXXXXXXXXXXXXXXXXXXXXXXYDFLFPV-SVKHN 191
           +EK I LKSSDG+   V++++AV+                        D   P+ +V   
Sbjct: 2   AEKMIVLKSSDGETFQVEESVAVESQTIKHMIEDDCA-----------DSSIPLPNVTSQ 50

Query: 192 VLCKVVDYCRKHAGAND------DDDLKTFDTNFVEVDRDMLLDLVLAANYLNIPSLMEL 353
           +L KV++YC++H  A+       +DDLK+FD +FV+VD+ ML DL+LAANYLNI SL++L
Sbjct: 51  ILAKVIEYCKRHVEASKTEDKATEDDLKSFDADFVKVDQSMLFDLILAANYLNIKSLLDL 110

Query: 354 TCKEIAGLVVHMNEDQVHEMFNIEND 431
           TC+ +A ++     +++ + FNI+ND
Sbjct: 111 TCQTVADMIKGKTPEEIRKTFNIKND 136


>ref|XP_004143010.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus]
           gi|449500366|ref|XP_004161077.1| PREDICTED: SKP1-like
           protein 1B-like [Cucumis sativus]
          Length = 157

 Score =  100 bits (248), Expect = 2e-19
 Identities = 57/149 (38%), Positives = 88/149 (59%), Gaps = 9/149 (6%)
 Frame = +3

Query: 12  TSEKKIGLKSSDGDIIIVDKAIAVQMXXXXXXXXXXXXXXXXXXXXXXYDFLFPV-SVKH 188
           +S +KI LKSSDG+I  VD+A+A++                        D   P+ +V  
Sbjct: 2   SSGRKITLKSSDGEIFEVDEAVALESQTIKHMIEDDCA-----------DSGIPLPNVNS 50

Query: 189 NVLCKVVDYCRKHAGA--------NDDDDLKTFDTNFVEVDRDMLLDLVLAANYLNIPSL 344
            +L KV++YC+KH  +        + DDDLKT+D+ FV+VD+  L DL+LAANYLNI SL
Sbjct: 51  KILSKVIEYCKKHVESPKPEDRTGSVDDDLKTWDSEFVKVDQATLFDLILAANYLNIKSL 110

Query: 345 MELTCKEIAGLVVHMNEDQVHEMFNIEND 431
           ++LTC+ +A ++     +++ + FNI+ND
Sbjct: 111 LDLTCQTVADMIKGKTPEEIRKTFNIKND 139


>ref|XP_004146156.1| PREDICTED: SKP1-like protein 1B-like [Cucumis sativus]
          Length = 155

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 55/146 (37%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
 Frame = +3

Query: 12  TSEKKIGLKSSDGDIIIVDKAIAVQMXXXXXXXXXXXXXXXXXXXXXXYDFLFPVSVKHN 191
           +S  KI LKSSDGD   VD A+A+Q                              +V   
Sbjct: 2   SSSNKITLKSSDGDYFQVDDAVALQSQTIRHMIEDNCAHNGIPLP----------NVNSK 51

Query: 192 VLCKVVDYCRKHAGAND------DDDLKTFDTNFVEVDRDMLLDLVLAANYLNIPSLMEL 353
           +L KV+ YCRKH  A+       +DDLKT+D +FV VD+  L DL+LAANYL++ SL++L
Sbjct: 52  ILAKVIQYCRKHVDASSADPLPSEDDLKTWDRDFVNVDQATLFDLILAANYLDVKSLLDL 111

Query: 354 TCKEIAGLVVHMNEDQVHEMFNIEND 431
           TC+ +A ++     +++ + FNI+ND
Sbjct: 112 TCQTVADMIKGKKPEEIRKTFNIKND 137


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