BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036237
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protei...    89   4e-16
gb|AAM52339.1| fertility restorer [Petunia x hybrida]                  84   9e-15
emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]         84   1e-14
gb|ACU33853.1| PPR1 protein [Capsicum annuum]                          81   8e-14
ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat...    80   1e-13

>emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/111 (41%), Positives = 68/111 (61%)
 Frame = -1

Query: 334 KEVDMGFAVLASMLKLGFAPDIVTINCLIKGLFFQQNVAKAVELLKKLIRDKLCKVDEFT 155
           K +    A++  M+++G+ PD VT N LI GLF     ++AV L+ +++  + C+ D FT
Sbjct: 165 KRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVA-RGCQPDLFT 223

Query: 154 IPIVLDGLAKSGNIVQALQLLDALEKEKYRLNATVYNTIINGLCKGLMLDD 2
              V++GL K G+I  AL LL  +EK K   N  +YNTII+GLCK   +DD
Sbjct: 224 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDD 274



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/111 (35%), Positives = 60/111 (54%)
 Frame = -1

Query: 334 KEVDMGFAVLASMLKLGFAPDIVTINCLIKGLFFQQNVAKAVELLKKLIRDKLCKVDEFT 155
           K V+ G  +   M + G   + VT N LI+GLF   +   A ++ KK++ D +   D  T
Sbjct: 410 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV-PPDIIT 468

Query: 154 IPIVLDGLAKSGNIVQALQLLDALEKEKYRLNATVYNTIINGLCKGLMLDD 2
             I+LDGL K G + +AL + + L+K K   N   YN +I G+CK   ++D
Sbjct: 469 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVED 519


>gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/107 (41%), Positives = 63/107 (58%)
 Frame = -1

Query: 325 DMGFAVLASMLKLGFAPDIVTINCLIKGLFFQQNVAKAVELLKKLIRDKLCKVDEFTIPI 146
           D+GF+VLA   K G   + VT   LI+GLF +  V  AV L KKL+R+ +C+ DE     
Sbjct: 124 DLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGT 183

Query: 145 VLDGLAKSGNIVQALQLLDALEKEKYRLNATVYNTIINGLCKGLMLD 5
           V+DGL K G+  +A  LL  +E+   + +  +YN +I+  CK  MLD
Sbjct: 184 VMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLD 230


>emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/111 (39%), Positives = 68/111 (61%)
 Frame = -1

Query: 334 KEVDMGFAVLASMLKLGFAPDIVTINCLIKGLFFQQNVAKAVELLKKLIRDKLCKVDEFT 155
           K +    A++  M+++G+ PD VT N LI GLF     ++AV L+ ++++ + C+ D  T
Sbjct: 164 KRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQ-RGCQPDLVT 222

Query: 154 IPIVLDGLAKSGNIVQALQLLDALEKEKYRLNATVYNTIINGLCKGLMLDD 2
              V++GL K G+I  AL LL  +EK K   +  +YNTII+GLCK   +DD
Sbjct: 223 YGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDD 273



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/111 (34%), Positives = 60/111 (54%)
 Frame = -1

Query: 334 KEVDMGFAVLASMLKLGFAPDIVTINCLIKGLFFQQNVAKAVELLKKLIRDKLCKVDEFT 155
           K V+ G  +   M + G   + VT N LI+GLF   +   A ++ KK++ D +   D  T
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV-PPDIIT 467

Query: 154 IPIVLDGLAKSGNIVQALQLLDALEKEKYRLNATVYNTIINGLCKGLMLDD 2
             I+LDGL K G + +AL + + L+K K   +   YN +I G+CK   ++D
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
 Frame = -1

Query: 331 EVDMGFAVLASMLKLGFAPDIVTINCLIKGLFFQQNVAKAVELLKKLIRDKLCKVDEFTI 152
           + DM   +   M+  G  PDI+T + L+ GL     + KA+ + + L + K+ + D +T 
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM-EPDIYTY 503

Query: 151 PIVLDGLAKSGNIVQALQLLDALEKEKYRLNATVYNTIINGLC-KGL 14
            I+++G+ K+G +     L  +L  +  + N  +Y T+I+G C KGL
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550


>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/108 (37%), Positives = 65/108 (60%)
 Frame = -1

Query: 328 VDMGFAVLASMLKLGFAPDIVTINCLIKGLFFQQNVAKAVELLKKLIRDKLCKVDEFTIP 149
           +D  F+VL   LK G   ++VT N L+ GLF +  V  AV L KKL+R+K+C+ +E    
Sbjct: 113 IDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYG 172

Query: 148 IVLDGLAKSGNIVQALQLLDALEKEKYRLNATVYNTIINGLCKGLMLD 5
            V++GL+K G+  + L LL  +E+   + +   Y+ +I+ LCK + LD
Sbjct: 173 TVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLD 220


>ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/105 (39%), Positives = 69/105 (65%)
 Frame = -1

Query: 334 KEVDMGFAVLASMLKLGFAPDIVTINCLIKGLFFQQNVAKAVELLKKLIRDKLCKVDEFT 155
           K V  GF+VL +M KLG  P ++T+  LI GL  Q NVA+AV L+  + + +   +D +T
Sbjct: 126 KLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRY-PLDVYT 184

Query: 154 IPIVLDGLAKSGNIVQALQLLDALEKEKYRLNATVYNTIINGLCK 20
             ++++GL K+G+ + A++ L  +E+  ++ N  VY+TI++GLCK
Sbjct: 185 YGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCK 229



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
 Frame = -1

Query: 334 KEVDMGFAVLASMLKLGFAPDIVTINCLIKGLFFQQNVAKAVELLKKLIRDKLCKVDEF- 158
           K ++    +L  M K+GF PD+VT   LI G         A EL   +   K  +V    
Sbjct: 371 KNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNM--HKYGQVPNLQ 428

Query: 157 TIPIVLDGLAKSGNIVQALQLLDALEKEKYRLNATVYNTIINGLC 23
           T  ++LDGL K   + +A+ L +A+EK    LN  +Y+ +++G+C
Sbjct: 429 TCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMC 473