BLASTX nr result

ID: Lithospermum22_contig00036182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036182
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   114   1e-23
emb|CAN72768.1| hypothetical protein VITISV_020056 [Vitis vinifera]   110   1e-22
ref|XP_003637286.1| hypothetical protein MTR_080s0034 [Medicago ...   108   6e-22
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]   105   3e-21
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   103   1e-20

>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  114 bits (284), Expect = 1e-23
 Identities = 48/85 (56%), Positives = 64/85 (75%)
 Frame = -1

Query: 336 R*NYNKKNVECFKCHKMGHFRYECPTSRKEVHYVEVDENEELLLMAHVKIVEDERKNTWF 157
           R  +NK  VEC+KCHK+GHF+YECP   +  +Y E++E EELLLMA+V+I   +R++ WF
Sbjct: 213 RQGFNKALVECYKCHKLGHFQYECPNWERTANYAELEEEEELLLMAYVEINNSKREDVWF 272

Query: 156 IDSECSNYMCNNVELFSNLDTNFKH 82
           +DS CSN+MC N + FSNLD  FKH
Sbjct: 273 LDSGCSNHMCGNRKWFSNLDETFKH 297


>emb|CAN72768.1| hypothetical protein VITISV_020056 [Vitis vinifera]
          Length = 673

 Score =  110 bits (275), Expect = 1e-22
 Identities = 42/85 (49%), Positives = 68/85 (80%)
 Frame = -1

Query: 336 R*NYNKKNVECFKCHKMGHFRYECPTSRKEVHYVEVDENEELLLMAHVKIVEDERKNTWF 157
           R ++NK  +EC +CH++GHFRYECP+  KE +Y+E+DE EE+LLM++V++ + +R++ WF
Sbjct: 174 RADFNKATMECCRCHQLGHFRYECPSGNKEANYLELDEKEEMLLMSYVELYKAKREDAWF 233

Query: 156 IDSECSNYMCNNVELFSNLDTNFKH 82
           +DS CS++MC +  +F+ LD NF+H
Sbjct: 234 LDSGCSSHMCGDRTMFNELDENFRH 258


>ref|XP_003637286.1| hypothetical protein MTR_080s0034 [Medicago truncatula]
           gi|355503221|gb|AES84424.1| hypothetical protein
           MTR_080s0034 [Medicago truncatula]
          Length = 332

 Score =  108 bits (269), Expect = 6e-22
 Identities = 43/81 (53%), Positives = 62/81 (76%)
 Frame = -1

Query: 324 NKKNVECFKCHKMGHFRYECPTSRKEVHYVEVDENEELLLMAHVKIVEDERKNTWFIDSE 145
           NK  VECFKCHK+GHF+YECP  ++  +YVE+DE EE+LLM+ V+    ++++ WF+DS 
Sbjct: 234 NKAIVECFKCHKLGHFQYECPRWKESANYVEIDEEEEMLLMSFVEATNSKQEDIWFLDSG 293

Query: 144 CSNYMCNNVELFSNLDTNFKH 82
           CSN+MC N + FS ++ +FKH
Sbjct: 294 CSNHMCGNKQWFSTINEDFKH 314


>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score =  105 bits (263), Expect = 3e-21
 Identities = 43/84 (51%), Positives = 63/84 (75%)
 Frame = -1

Query: 336 R*NYNKKNVECFKCHKMGHFRYECPTSRKEVHYVEVDENEELLLMAHVKIVEDERKNTWF 157
           R  +NK  VEC+KCH++GHF+YECP   KE +Y E++E EE+LLM++V++ +  R++ WF
Sbjct: 179 RQTFNKAIVECYKCHQLGHFQYECPKWEKEANYAELEEKEEMLLMSYVELNQSRREDVWF 238

Query: 156 IDSECSNYMCNNVELFSNLDTNFK 85
           +DS CSN+MC N E F +LD  F+
Sbjct: 239 LDSGCSNHMCANKEWFLDLDEEFR 262


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis
           thaliana]
          Length = 1334

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/80 (57%), Positives = 59/80 (73%)
 Frame = -1

Query: 324 NKKNVECFKCHKMGHFRYECPTSRKEVHYVEVDENEELLLMAHVKIVEDERKNTWFIDSE 145
           N+  VECFKCHKMGH++ ECP+  KE +YVE++E  +LLLMAHV+ + DE K  WF+DS 
Sbjct: 245 NRDTVECFKCHKMGHYKAECPSWEKEANYVEMEE--DLLLMAHVEQIGDEEKQIWFLDSG 302

Query: 144 CSNYMCNNVELFSNLDTNFK 85
           CSN+MC   E F  LD+ FK
Sbjct: 303 CSNHMCGTREWFLELDSGFK 322


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