BLASTX nr result

ID: Lithospermum22_contig00036148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036148
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531621.1| 50S ribosomal protein L15, putative [Ricinus...    55   8e-06

>ref|XP_002531621.1| 50S ribosomal protein L15, putative [Ricinus communis]
           gi|223528739|gb|EEF30749.1| 50S ribosomal protein L15,
           putative [Ricinus communis]
          Length = 263

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = +3

Query: 3   STSCNHPYTFFKGNVQSLKNKTSVVQNEVFSVMDKQGTR-LIVHCQASPAAAIPTSFESS 179
           S   ++P + FKGN+ SL+ KT  +    F+    +GT+ L+V  QA   AA      SS
Sbjct: 6   SPHLHYPSSHFKGNLTSLRLKTCTLIPLNFNNAKPKGTQQLVVINQARSTAAAAIQSASS 65

Query: 180 KVRLRLDNLGPRSGATKKANRK 245
            VR RLDNLGP+ G+ K+  RK
Sbjct: 66  GVRFRLDNLGPQRGSRKRGKRK 87


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