BLASTX nr result

ID: Lithospermum22_contig00036138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036138
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    56   4e-06
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    56   4e-06
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    55   8e-06

>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/54 (42%), Positives = 33/54 (61%)
 Frame = +3

Query: 213  VVWKYVCREKIEGDLGIRRLHD*NTTSMVYHVWNLCSRKETLWV*WINSYRLKG 374
            V W  +CR K +G +GI  L   N  S++  +WN+C   E LWV W+++Y LKG
Sbjct: 1169 VAWDTMCRNKSQGGVGIINLQVWNIVSLMKCLWNICRNSENLWVLWVHTYYLKG 1222


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/54 (42%), Positives = 33/54 (61%)
 Frame = +3

Query: 213  VVWKYVCREKIEGDLGIRRLHD*NTTSMVYHVWNLCSRKETLWV*WINSYRLKG 374
            V W  +CR K +G +GI  L   N  S++  +WN+C   E LWV W+++Y LKG
Sbjct: 1052 VAWDTMCRNKSQGGVGIINLQVWNIVSLMKCLWNICRNSENLWVMWVHTYYLKG 1105


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/64 (39%), Positives = 38/64 (59%)
 Frame = +3

Query: 180 SKP*RSLFNAKVVWKYVCREKIEGDLGIRRLHD*NTTSMVYHVWNLCSRKETLWV*WINS 359
           S P  S   AK+ W+ VCR K EG LG++ + + N    +  +W + S+ ++LWV WI +
Sbjct: 367 SGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRT 426

Query: 360 YRLK 371
           Y LK
Sbjct: 427 YLLK 430


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