BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036100
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514235.1| pentatricopeptide repeat-containing protein,...   140   1e-31
ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi...   131   9e-29
ref|XP_002332354.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
gb|AFK47126.1| unknown [Medicago truncatula]                          119   3e-25
ref|XP_003630737.1| Pentatricopeptide repeat-containing protein ...   119   3e-25

>ref|XP_002514235.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546691|gb|EEF48189.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 352

 Score =  140 bits (354), Expect = 1e-31
 Identities = 82/177 (46%), Positives = 102/177 (57%), Gaps = 14/177 (7%)
 Frame = -2

Query: 491 MKSLHVLI-------SRHHKTTVFRHLNHTSA-------ASISPYNYSQNDYAKEIAEQV 354
           M SLH L        S     T+  HLNH+ A       A   P   S  D AK  A Q 
Sbjct: 1   MNSLHHLFLLGFRKSSTFKNLTISCHLNHSLAFFSASSDAQTPPLPQSAQDIAKWAATQS 60

Query: 353 SSSPNIIHLNQIFTTILKTHFLYFNPAPFHYNNIARAFARLHAPKKALFLYIKMIRDGVA 174
           S+   +  LNQI+  I+ +  L+F  APFH+NNI R++ RL AP KAL +YI M R GV 
Sbjct: 61  SNCTTLRDLNQIYAHIICSDLLHFYSAPFHWNNIIRSYTRLDAPVKALQVYISMSRAGVL 120

Query: 173 TDTYTLPIVLKAACHFFEKRLCGQLHCVAVKYGVEKNMYCESGFICFYLRCGEIENA 3
            D+YTLPIVLKAAC  F   +  QL  VA++ G+E N YCESGFI FY + G+I+NA
Sbjct: 121 PDSYTLPIVLKAACQIFSIEIGKQLQSVAIRLGLESNEYCESGFISFYSKSGDIKNA 177


>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
           [Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
           protein product [Vitis vinifera]
          Length = 479

 Score =  131 bits (329), Expect = 9e-29
 Identities = 64/127 (50%), Positives = 84/127 (66%)
 Frame = -2

Query: 383 DYAKEIAEQVSSSPNIIHLNQIFTTILKTHFLYFNPAPFHYNNIARAFARLHAPKKALFL 204
           D A+ IA  +S   N+I LNQ+   I++THFL   PAPF +NNI R++ RL A   AL +
Sbjct: 57  DTAQTIASHLSKCANLIELNQLLAHIIRTHFLELYPAPFQWNNIIRSYTRLEAHHYALSI 116

Query: 203 YIKMIRDGVATDTYTLPIVLKAACHFFEKRLCGQLHCVAVKYGVEKNMYCESGFICFYLR 24
           YI M R GV+ D+YT+PIVLKA C  F      Q+H VA+++G+E N YCESGFI  Y +
Sbjct: 117 YIAMSRAGVSPDSYTIPIVLKAVCQAFATGFGRQVHSVAIRHGLELNEYCESGFISVYSK 176

Query: 23  CGEIENA 3
            GE +NA
Sbjct: 177 AGEFQNA 183


>ref|XP_002332354.1| predicted protein [Populus trichocarpa] gi|222832075|gb|EEE70552.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  127 bits (320), Expect = 1e-27
 Identities = 61/130 (46%), Positives = 84/130 (64%)
 Frame = -2

Query: 392 SQNDYAKEIAEQVSSSPNIIHLNQIFTTILKTHFLYFNPAPFHYNNIARAFARLHAPKKA 213
           S  D +K IA Q+S+  ++  LNQ +  +++TH L    APFH+NN+ R + RL AP KA
Sbjct: 1   SNQDPSKTIATQLSNCTSLQELNQTYAHVIRTHVLDVYTAPFHWNNLIRCYTRLGAPNKA 60

Query: 212 LFLYIKMIRDGVATDTYTLPIVLKAACHFFEKRLCGQLHCVAVKYGVEKNMYCESGFICF 33
           L +Y+ M   G++ D YTLPIVLKAAC  F   L  QLH +A++ G+E N YCESGFI  
Sbjct: 61  LQIYVSMSHAGISPDNYTLPIVLKAACQCFSMELGRQLHSIAIRLGLELNEYCESGFISL 120

Query: 32  YLRCGEIENA 3
           Y + G+  +A
Sbjct: 121 YSKSGDFGDA 130


>gb|AFK47126.1| unknown [Medicago truncatula]
          Length = 447

 Score =  119 bits (299), Expect = 3e-25
 Identities = 61/130 (46%), Positives = 83/130 (63%)
 Frame = -2

Query: 392 SQNDYAKEIAEQVSSSPNIIHLNQIFTTILKTHFLYFNPAPFHYNNIARAFARLHAPKKA 213
           S ND    IA  +S++  I  LNQI+  IL T FL  NPA F++NNI R++ RL +P+ A
Sbjct: 22  SGNDPVTVIATLLSNTTRIRDLNQIYAHILLTRFLESNPASFNWNNIIRSYTRLESPQNA 81

Query: 212 LFLYIKMIRDGVATDTYTLPIVLKAACHFFEKRLCGQLHCVAVKYGVEKNMYCESGFICF 33
           L +Y+ M+R GV  D YTLPIVLKA    F  +L  Q+H   +K G++ N YCESGFI  
Sbjct: 82  LRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINL 141

Query: 32  YLRCGEIENA 3
           Y + G+ ++A
Sbjct: 142 YCKAGDFDSA 151


>ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524759|gb|AET05213.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 447

 Score =  119 bits (299), Expect = 3e-25
 Identities = 61/130 (46%), Positives = 83/130 (63%)
 Frame = -2

Query: 392 SQNDYAKEIAEQVSSSPNIIHLNQIFTTILKTHFLYFNPAPFHYNNIARAFARLHAPKKA 213
           S ND    IA  +S++  I  LNQI+  IL T FL  NPA F++NNI R++ RL +P+ A
Sbjct: 22  SGNDPVTVIATLLSNTTRIRDLNQIYAHILLTRFLESNPASFNWNNIIRSYTRLESPQNA 81

Query: 212 LFLYIKMIRDGVATDTYTLPIVLKAACHFFEKRLCGQLHCVAVKYGVEKNMYCESGFICF 33
           L +Y+ M+R GV  D YTLPIVLKA    F  +L  Q+H   +K G++ N YCESGFI  
Sbjct: 82  LRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINL 141

Query: 32  YLRCGEIENA 3
           Y + G+ ++A
Sbjct: 142 YCKAGDFDSA 151