BLASTX nr result

ID: Lithospermum22_contig00036020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036020
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD24652.1| putative non-LTR retroelement reverse transcripta...    59   5e-07

>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 977

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
 Frame = -3

Query: 326 RPWILTGDFNVIKDVSLASGCSHPPAI--AMKEFNDCLETIDVTEVASHGCVFTWSPNWK 153
           +PW++ GDFNV  D+   S C   P +   M++F   + + D++++ASHG ++TW  N K
Sbjct: 342 KPWLIFGDFNVTLDMKEHSNCDSNPVVTSGMRDFQQMIRSCDLSDMASHGPLYTWC-NKK 400

Query: 152 SRDLSLRRPDYVFL 111
            +DL L++ D V +
Sbjct: 401 EQDLILKKLDRVMV 414


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