BLASTX nr result
ID: Lithospermum22_contig00035975
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00035975
(480 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA97917.2| retrotransposon protein, putative, Ty3-gypsy subc... 38 1e-08
ref|XP_003629218.1| TNP2 [Medicago truncatula] gi|355523240|gb|A... 40 4e-08
ref|XP_002277587.2| PREDICTED: uncharacterized protein LOC100258... 42 2e-07
emb|CAN78967.1| hypothetical protein VITISV_027273 [Vitis vinifera] 40 5e-06
emb|CAA40555.1| TNP2 [Antirrhinum majus] 35 8e-06
>gb|ABA97917.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 1846
Score = 38.1 bits (87), Expect(3) = 1e-08
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 85 MDKSWIESDDRASTIYMSGVQNFLDFAFS 171
MDK+W++ + R + IY+ GV NFLDFAFS
Sbjct: 1 MDKAWMD-EPRHTQIYIQGVDNFLDFAFS 28
Score = 33.5 bits (75), Expect(3) = 1e-08
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Frame = +2
Query: 275 YKNWRFHGESFESLHMNN-----GVDFDCENDIVGMLCDGMGF-LVDNNQFEGP------ 418
Y+ W FHGE+ S N+ G + E+D + L + F L D +FE
Sbjct: 67 YRTWMFHGETSSSFVDNHDSDEVGSEHSREDDDISDLVRDLAFGLDDRGEFEDASSEPIN 126
Query: 419 NDDTKKLF*LMEEAEVELY 475
+DD + L L+E A ELY
Sbjct: 127 DDDLEALQKLVEGASQELY 145
Score = 31.6 bits (70), Expect(3) = 1e-08
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 171 VGSKIYCSCSKCHNRLTKKGHEIVIHCLKDGFLKHIR 281
+G KI C C KC N K +I + DGF+K R
Sbjct: 32 IGDKILCPCRKCVNSSWKNRSDIREDLICDGFVKGYR 68
>ref|XP_003629218.1| TNP2 [Medicago truncatula] gi|355523240|gb|AET03694.1| TNP2
[Medicago truncatula]
Length = 156
Score = 39.7 bits (91), Expect(3) = 4e-08
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Frame = +2
Query: 275 YKNWRFHGESFE-SLHMNNGVDFDCEN---DIVGMLCDGMGFLVD-NNQFEGPNDDTKKL 439
Y W HGE + +++GV+ D EN DI G+L D + + + +GPN+D KK
Sbjct: 84 YDVWVNHGEQITLPMEIDDGVE-DKENSRDDIDGLLYDTFRHVAEVEGRNKGPNEDAKKF 142
Query: 440 F*LMEEAEVELY 475
+ L+ EA+ ELY
Sbjct: 143 YNLINEAKQELY 154
Score = 32.7 bits (73), Expect(3) = 4e-08
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 174 GSKIYCSCSKCHNRLTKKGHEIVIHCLKDGFLK 272
GS I C CS C NR K+ + H + GFL+
Sbjct: 50 GSTILCPCSNCRNRYWKRRKVVRDHLIGSGFLQ 82
Score = 29.3 bits (64), Expect(3) = 4e-08
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 85 MDKSWIESDDRASTIYMSGVQNFLDFAFS 171
MDK W R + Y GV++FLDFAF+
Sbjct: 17 MDKEWTNLH-RLNPEYRKGVESFLDFAFT 44
>ref|XP_002277587.2| PREDICTED: uncharacterized protein LOC100258569 [Vitis vinifera]
Length = 783
Score = 41.6 bits (96), Expect(3) = 2e-07
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Frame = +2
Query: 248 LLKRRVS*TYKNWRFHGESFESLHMNNGV--DFDCENDIVGMLCDGMGFLVDNNQ----- 406
LL ++ Y W HGE FE N + D +++ ML D G + N +
Sbjct: 60 LLDNGIARNYVRWLMHGE-FEFCEPTNTSTNESDMHDEMQEMLNDAFGMPMPNEESERSR 118
Query: 407 -----FEGPNDDTKKLF*LMEEAEVELY 475
FE PN+D K + L+ EAE ELY
Sbjct: 119 HVHEEFEKPNEDANKFYNLLREAEQELY 146
Score = 33.5 bits (75), Expect(3) = 2e-07
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 85 MDKSWIESDDRASTIYMSGVQNFLDFAFS 171
+DKSW++ R S+ Y GV FLDFAFS
Sbjct: 3 IDKSWMQKS-RVSSEYYKGVLEFLDFAFS 30
Score = 23.9 bits (50), Expect(3) = 2e-07
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 189 CSCSKCHNRLTKKGHEIVIHCLKDGFLKH 275
C C +C+N L +K + H L +G ++
Sbjct: 40 CPCIRCNNCLMQKREIMYDHLLDNGIARN 68
>emb|CAN78967.1| hypothetical protein VITISV_027273 [Vitis vinifera]
Length = 1163
Score = 40.0 bits (92), Expect(3) = 5e-06
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Frame = +2
Query: 248 LLKRRVS*TYKNWRFHGESFESLHMNNGV--DFDCENDIVGMLCDGMGFLVDNNQ----- 406
LL ++ Y W HGE +E N +F +++ ML D G + N +
Sbjct: 60 LLDNGIASNYVRWLMHGE-YEFCEPTNTSTNEFVMHDEMQEMLNDAFGMPMPNEEXERSL 118
Query: 407 -----FEGPNDDTKKLF*LMEEAEVELY 475
FE PN+D K + L+ EAE ELY
Sbjct: 119 HVHEEFEKPNEDANKFYNLLSEAEQELY 146
Score = 32.0 bits (71), Expect(3) = 5e-06
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 85 MDKSWIESDDRASTIYMSGVQNFLDFAFS 171
+DKSW + R S+ Y GV FLDFAFS
Sbjct: 3 IDKSW-KQKSRVSSEYHKGVLEFLDFAFS 30
Score = 21.9 bits (45), Expect(3) = 5e-06
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 189 CSCSKCHNRLTKKGHEIVIHCLKDG 263
C C +C+N L +K + H L +G
Sbjct: 40 CPCIRCNNCLMQKRVIMYDHLLDNG 64
>emb|CAA40555.1| TNP2 [Antirrhinum majus]
Length = 752
Score = 34.7 bits (78), Expect(3) = 8e-06
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Frame = +2
Query: 275 YKNWRFHGESFESLHMNNGVDFDCEN---DIVGMLCDGMGFLVDN-------NQFEGPND 424
Y +W HGE S + N + + N D+ ++ D G DN N+ E PN+
Sbjct: 72 YTHWVIHGEG--SSNSQNNIQNERLNTFEDMHNLVHDAFGVEDDNINSEEEPNEEEEPNE 129
Query: 425 DTKKLF*LMEEAEVELY 475
+ K + L+++A+ ELY
Sbjct: 130 EAKTFYKLLDDAQQELY 146
Score = 30.0 bits (66), Expect(3) = 8e-06
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 85 MDKSWIESDDRASTIYMSGVQNFLDFAF 168
MDKSW+ R + Y +G+ FLDFAF
Sbjct: 6 MDKSWMHKS-RLTEEYENGLDQFLDFAF 32
Score = 28.5 bits (62), Expect(3) = 8e-06
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 171 VGSKIYCSCSKCHNRLTKKGHEIVIHCLKDGFLK 272
+ KI C C +C N L H + DGF+K
Sbjct: 37 LNGKIICPCKQCKNALWMDRETAKEHLIIDGFIK 70