BLASTX nr result

ID: Lithospermum22_contig00035884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035884
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE17114.1| Cys2-His2 type zinc finger protein [Nicotiana ta...   142   1e-31
dbj|BAA05079.1| zinc-finger protein [Petunia x hybrida]               142   1e-31
gb|AAQ54303.1| zinc finger protein PIF1 [Nicotiana benthamiana]       141   1e-31
gb|AAQ10954.1| zinc finger protein [Capsicum annuum] gi|33771372...   141   2e-31
ref|NP_001234718.1| C2H2-type zinc finger protein [Solanum lycop...   140   2e-31

>dbj|BAE17114.1| Cys2-His2 type zinc finger protein [Nicotiana tabacum]
          Length = 253

 Score =  142 bits (357), Expect = 1e-31
 Identities = 76/159 (47%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
 Frame = +2

Query: 2   KCSVCNKGFGSYQALGGHKASHRK----------QPXXXXXXXXXXXXXXXXXXXXXXXK 151
           KCSVC KGFGSYQALGGHKASHRK          Q                        K
Sbjct: 94  KCSVCGKGFGSYQALGGHKASHRKLVAGGGGGDDQSTTSTTTNATGTTSSANGNGNGSGK 153

Query: 152 THECSICHRCFPSGQALGGHKRCHYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRNF 331
           THECSICH+CFP+GQALGGHKRCHY+                              HR+F
Sbjct: 154 THECSICHKCFPTGQALGGHKRCHYD---GGNSNASVSVSASVGVTSSEGVGSTVSHRDF 210

Query: 332 DLNLPAFPELFPGFGTLDEEVESPHPMKKPRLMFPFKFE 448
           DLN+PA PE +P FG  ++EVESPHP KK RL  P KFE
Sbjct: 211 DLNIPALPEFWPRFGFGEDEVESPHPAKKSRLSLPPKFE 249


>dbj|BAA05079.1| zinc-finger protein [Petunia x hybrida]
          Length = 253

 Score =  142 bits (357), Expect = 1e-31
 Identities = 74/154 (48%), Positives = 84/154 (54%), Gaps = 5/154 (3%)
 Frame = +2

Query: 2   KCSVCNKGFGSYQALGGHKASHRKQ-----PXXXXXXXXXXXXXXXXXXXXXXXKTHECS 166
           KCSVC KGFGSYQALGGHKASHRK                              +THECS
Sbjct: 99  KCSVCGKGFGSYQALGGHKASHRKLVSMGGDEQSTTSTTTNVTGTSSANVNGNGRTHECS 158

Query: 167 ICHRCFPSGQALGGHKRCHYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRNFDLNLP 346
           ICH+CFP+GQALGGHKRCHY+                              HR+FDLN+P
Sbjct: 159 ICHKCFPTGQALGGHKRCHYDGGNGNGNGSVSVGVTSSEGVGSTISH----HRDFDLNIP 214

Query: 347 AFPELFPGFGTLDEEVESPHPMKKPRLMFPFKFE 448
           A PE +PGFG+ ++EVESPHP KK RL  P K E
Sbjct: 215 ALPEFWPGFGSGEDEVESPHPAKKSRLSLPPKLE 248


>gb|AAQ54303.1| zinc finger protein PIF1 [Nicotiana benthamiana]
          Length = 253

 Score =  141 bits (356), Expect = 1e-31
 Identities = 76/159 (47%), Positives = 85/159 (53%), Gaps = 10/159 (6%)
 Frame = +2

Query: 2   KCSVCNKGFGSYQALGGHKASHRK----------QPXXXXXXXXXXXXXXXXXXXXXXXK 151
           KCSVC KGFGSYQALGGHKASHRK          Q                        K
Sbjct: 94  KCSVCGKGFGSYQALGGHKASHRKLVAGGGGGDDQSTTSTTTNATGTTSSANGNGNGSGK 153

Query: 152 THECSICHRCFPSGQALGGHKRCHYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRNF 331
           THECSICH+ FP+GQALGGHKRCHY+                              HR+F
Sbjct: 154 THECSICHKRFPTGQALGGHKRCHYDGGNSNGGVSVSASVGLTSSEGVGSTVS---HRDF 210

Query: 332 DLNLPAFPELFPGFGTLDEEVESPHPMKKPRLMFPFKFE 448
           DLN+PA PE +PGFG+ ++EVESPHP KK RL  P KFE
Sbjct: 211 DLNIPALPEFWPGFGSGEDEVESPHPTKKSRLSLPPKFE 249


>gb|AAQ10954.1| zinc finger protein [Capsicum annuum] gi|33771372|gb|AAQ54302.1|
           zinc finger protein PIF1 [Capsicum annuum]
           gi|37781568|gb|AAP41717.1| cys2/his2-type zinc finger
           transcription factor [Capsicum annuum]
          Length = 261

 Score =  141 bits (355), Expect = 2e-31
 Identities = 74/156 (47%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
 Frame = +2

Query: 2   KCSVCNKGFGSYQALGGHKASHRK-------QPXXXXXXXXXXXXXXXXXXXXXXXKTHE 160
           KCSVC KGFGSYQALGGHKASHRK       Q                        +THE
Sbjct: 103 KCSVCGKGFGSYQALGGHKASHRKLVPGGDDQSTTSTTTNATGTTTSVNGNGNRSGRTHE 162

Query: 161 CSICHRCFPSGQALGGHKRCHYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRNFDLN 340
           CSICH+CFP+GQALGGHKRCHY+                              HR+FDLN
Sbjct: 163 CSICHKCFPTGQALGGHKRCHYD-GGIGNGNANSGVSASVGVTSSEGVGSTVSHRDFDLN 221

Query: 341 LPAFPELFPGFGTLDEEVESPHPMKKPRLMFPFKFE 448
           +PA PE + GFG+ ++EVESPHP KK RL  P K+E
Sbjct: 222 IPALPEFWLGFGSGEDEVESPHPAKKSRLCLPPKYE 257


>ref|NP_001234718.1| C2H2-type zinc finger protein [Solanum lycopersicum]
           gi|150406379|gb|ABR68563.1| C2H2-type zinc finger
           protein [Solanum lycopersicum]
           gi|302028373|gb|ADK91083.1| cold zinc finger protein 1
           [Solanum lycopersicum]
          Length = 260

 Score =  140 bits (354), Expect = 2e-31
 Identities = 74/161 (45%), Positives = 85/161 (52%), Gaps = 12/161 (7%)
 Frame = +2

Query: 2   KCSVCNKGFGSYQALGGHKASHRK---------QPXXXXXXXXXXXXXXXXXXXXXXXKT 154
           +CSVC KGFGSYQALGGHKASHRK                                  +T
Sbjct: 96  RCSVCGKGFGSYQALGGHKASHRKLIAGGDDQSTTSTTTNANGTTSSGNGNGNGSGTGRT 155

Query: 155 HECSICHRCFPSGQALGGHKRCHYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---HR 325
           HECSICH+CFP+GQALGGHKRCHY+                                 HR
Sbjct: 156 HECSICHKCFPTGQALGGHKRCHYDGGNSNGNGNANANSSISASVGVTSSEGVGSTISHR 215

Query: 326 NFDLNLPAFPELFPGFGTLDEEVESPHPMKKPRLMFPFKFE 448
           +FDLN+PA PE +PGFG+ ++EVESPHP KK RL  P KFE
Sbjct: 216 DFDLNIPALPEFWPGFGSGEDEVESPHPAKKSRLSLPPKFE 256


Top