BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035864
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [S...   119   3e-25
ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa In...   118   4e-25
gb|ABA99232.1| retrotransposon protein, putative, Ty1-copia subc...   118   4e-25
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   118   4e-25
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   118   4e-25

>ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [Sorghum bicolor]
           gi|241942867|gb|EES16012.1| hypothetical protein
           SORBIDRAFT_08g015513 [Sorghum bicolor]
          Length = 757

 Score =  119 bits (297), Expect = 3e-25
 Identities = 68/142 (47%), Positives = 91/142 (64%), Gaps = 12/142 (8%)
 Frame = +3

Query: 6   CKWIYKVKLKANGSIEIYKDRLVVKGFT*RYGIDYIETFSPVVKMATVRCILSISVANQW 185
           CKW+YKVK +A+GS++ YK RLV KGF  RYGIDY +TFSPVVK AT+R ILSI+V+N W
Sbjct: 300 CKWLYKVKRRADGSVDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRLILSIAVSNGW 359

Query: 186 PLFQLDINNAFLH-------VMKRSICSLLK-----ISMLQLALFADLGNLYTALRQWFS 329
            L QLD+ NAFLH        M + +  + K     +  L+ AL+     L  A R W++
Sbjct: 360 LLRQLDVQNAFLHGVLDEEDYMDQPLGYVSKLHPGYVCKLEKALY----ELKQAPRAWYA 415

Query: 330 KLSNEPIHLSYPRSNNDYSLYY 395
           +LS++ I L +  S  D SL+Y
Sbjct: 416 RLSSKLISLRFKSSRADTSLFY 437


>ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa Indica Group]
           gi|289065044|ref|YP_003433855.1| hypothetical protein
           OrrupM_p18 [Oryza rufipogon] gi|74100111|gb|AAZ99275.1|
           hypothetical protein (mitochondrion) [Oryza sativa
           Indica Group] gi|74100166|gb|AAZ99329.1| hypothetical
           protein (mitochondrion) [Oryza sativa Japonica Group]
           gi|74100220|gb|AAZ99382.1| hypothetical protein
           (mitochondrion) [Oryza sativa Japonica Group]
           gi|285026126|dbj|BAI67959.1| hypothetical protein [Oryza
           rufipogon] gi|285026155|dbj|BAI67987.1| hypothetical
           protein [Oryza sativa Indica Group]
           gi|353685219|gb|AER12982.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|353685288|gb|AER13050.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|374277649|gb|AEZ03755.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|374277659|gb|AEZ03764.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
          Length = 490

 Score =  118 bits (296), Expect = 4e-25
 Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 12/142 (8%)
 Frame = +3

Query: 6   CKWIYKVKLKANGSIEIYKDRLVVKGFT*RYGIDYIETFSPVVKMATVRCILSISVANQW 185
           CKW+YK+K KA+G+I+ YK RLV KGF  RYGIDY ETFSPVVK AT+R ILS++V+N W
Sbjct: 28  CKWVYKIKRKADGTIDRYKARLVAKGFKQRYGIDYEETFSPVVKAATIRLILSLAVSNGW 87

Query: 186 PLFQLDINNAFLH-VMKRSI-----------CSLLKISMLQLALFADLGNLYTALRQWFS 329
            L QLD+ NAFLH V++  +             L  +  L  AL+     L  A R WFS
Sbjct: 88  SLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCKLDKALY----GLKQAPRAWFS 143

Query: 330 KLSNEPIHLSYPRSNNDYSLYY 395
           +LS +  +L +  S  D SL++
Sbjct: 144 RLSMKLQNLGFQPSKADASLFF 165


>gb|ABA99232.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 308

 Score =  118 bits (296), Expect = 4e-25
 Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 12/142 (8%)
 Frame = +3

Query: 6   CKWIYKVKLKANGSIEIYKDRLVVKGFT*RYGIDYIETFSPVVKMATVRCILSISVANQW 185
           CKW+YK+K KA+G+I+ YK RLV KGF  RYGIDY ETFSPVVK AT+R ILS++V+N W
Sbjct: 28  CKWVYKIKRKADGTIDRYKARLVAKGFKQRYGIDYEETFSPVVKAATIRLILSLAVSNGW 87

Query: 186 PLFQLDINNAFLH-VMKRSI-----------CSLLKISMLQLALFADLGNLYTALRQWFS 329
            L QLD+ NAFLH V++  +             L  +  L  AL+     L  A R WFS
Sbjct: 88  SLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSKLDYVCKLDKALY----GLKQAPRAWFS 143

Query: 330 KLSNEPIHLSYPRSNNDYSLYY 395
           +LS +  +L +  S  D SL++
Sbjct: 144 RLSMKLQNLGFQPSKADASLFF 165


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  118 bits (296), Expect = 4e-25
 Identities = 67/145 (46%), Positives = 88/145 (60%), Gaps = 13/145 (8%)
 Frame = +3

Query: 6    CKWIYKVKLKANGSIEIYKDRLVVKGFT*RYGIDYIETFSPVVKMATVRCILSISVANQW 185
            CKW+YK+K KA+G+++ YK RLV KGF  RYGIDY +TFSPVVK AT+R ILS++V+  W
Sbjct: 988  CKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGW 1047

Query: 186  PLFQLDINNAFLHVMKRSICSLLKISMLQLALFAD-------------LGNLYTALRQWF 326
             L QLD+ NAFLH          ++ MLQ   F D             L  L  A R WF
Sbjct: 1048 SLRQLDVQNAFLHGYLEE-----EVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWF 1102

Query: 327  SKLSNEPIHLSYPRSNNDYSLYYLH 401
            S+LS + + L +  S  D SL++L+
Sbjct: 1103 SRLSKKLMDLGFKGSKPDTSLFFLN 1127


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  118 bits (296), Expect = 4e-25
 Identities = 67/145 (46%), Positives = 88/145 (60%), Gaps = 13/145 (8%)
 Frame = +3

Query: 6    CKWIYKVKLKANGSIEIYKDRLVVKGFT*RYGIDYIETFSPVVKMATVRCILSISVANQW 185
            CKW+YK+K KA+G+++ YK RLV KGF  RYGIDY +TFSPVVK AT+R ILS++V+  W
Sbjct: 710  CKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGW 769

Query: 186  PLFQLDINNAFLHVMKRSICSLLKISMLQLALFAD-------------LGNLYTALRQWF 326
             L QLD+ NAFLH          ++ MLQ   F D             L  L  A R WF
Sbjct: 770  SLRQLDVQNAFLHGYLEE-----EVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWF 824

Query: 327  SKLSNEPIHLSYPRSNNDYSLYYLH 401
            S+LS + + L +  S  D SL++L+
Sbjct: 825  SRLSKKLMDLGFKGSKADTSLFFLN 849