BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035810
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307242.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|NP_190611.1| pentatricopeptide repeat-containing protein [Ar...    75   4e-12
ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_002877745.1| pentatricopeptide repeat-containing protein ...    68   9e-10
ref|XP_002522354.1| pentatricopeptide repeat-containing protein,...    64   2e-08

>ref|XP_002307242.1| predicted protein [Populus trichocarpa] gi|222856691|gb|EEE94238.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 35/78 (44%), Positives = 55/78 (70%)
 Frame = -2

Query: 235 SSCGNLDSAKKVFRLMEIKDDMVWDFMIFGSIKNGVVLEGLKIFSGMRKNHACPNQFTFA 56
           S+CG+L+SA KVF  +  KD ++W+ MIFG++KN  + EG+ +F  M ++   P +FT++
Sbjct: 56  SNCGDLESANKVFGCVVQKDAVLWNSMIFGNLKNEKLEEGVLLFGKMVRHGIVPTEFTYS 115

Query: 55  MVLNGCSKLEDSRIGQIV 2
           M+LN C KL D R GQ++
Sbjct: 116 MILNACGKLGDCRWGQVI 133


>ref|NP_190611.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75202753|sp|Q9SCT2.1|PP277_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g50420 gi|6561982|emb|CAB62471.1| putative protein
           [Arabidopsis thaliana] gi|332645144|gb|AEE78665.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 794

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 33/78 (42%), Positives = 53/78 (67%)
 Frame = -2

Query: 235 SSCGNLDSAKKVFRLMEIKDDMVWDFMIFGSIKNGVVLEGLKIFSGMRKNHACPNQFTFA 56
           SSCG+L+SA+++F  +  +D + W+ MI GS+KN  + +GL  F  M  +   P QFT++
Sbjct: 245 SSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYS 304

Query: 55  MVLNGCSKLEDSRIGQIV 2
           +VLNGCSKL    +G+++
Sbjct: 305 IVLNGCSKLGSYSLGKLI 322


>ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Glycine max]
          Length = 715

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/78 (42%), Positives = 50/78 (64%)
 Frame = -2

Query: 235 SSCGNLDSAKKVFRLMEIKDDMVWDFMIFGSIKNGVVLEGLKIFSGMRKNHACPNQFTFA 56
           S+CG+L SA+ VF  M  +D + W+ +I G +KN  + EG+ +F  M      P QFT+ 
Sbjct: 161 SNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWLFIKMMSVGFAPTQFTYC 220

Query: 55  MVLNGCSKLEDSRIGQIV 2
           MVLN CS+L+D R G+++
Sbjct: 221 MVLNSCSRLKDYRSGRLI 238


>ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323583|gb|EFH54004.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 764

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
 Frame = -2

Query: 235 SSCGNLDSAKKVFRLMEIKDDMVWDFMIFGSIKNGVVLEGLKIFSGMRKNHACPNQFTFA 56
           SSCG+L+SA+++F  +   D + W+ MI G  +N  + +GL +F  M  +   P QFT++
Sbjct: 158 SSCGDLESARRIFECVNGGDAVAWNTMIVGIFRNDKIEDGLMLFRSMLMSGVDPTQFTYS 217

Query: 55  MVLNGCSKLEDSR--IGQIV 2
           MVLN CSKL   R  +G+++
Sbjct: 218 MVLNACSKLGSYRYSVGKLI 237


>ref|XP_002522354.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538432|gb|EEF40038.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 704

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)
 Frame = -2

Query: 235 SSCGNLDSAKKVFRLMEIKDDMVWDFMIFGSIKNGVVLEGLKIFSGMRKNHACPNQFTFA 56
           S CG+L+SA KVF     KDD+ W+ MI G +KN  + E L +F  M ++     QFT +
Sbjct: 156 SDCGDLESACKVFGYAVEKDDVFWNSMISGYLKNDRIKESLSLFGEMVRSGTIFTQFTCS 215

Query: 55  MVLNGCSKLEDSRIGQIV 2
           M LN CSKL     G+I+
Sbjct: 216 MALNACSKLGYYSQGRII 233