BLASTX nr result

ID: Lithospermum22_contig00035786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035786
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   105   3e-21
gb|AFK43647.1| unknown [Medicago truncatula]                          104   6e-21
ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-l...   101   5e-20
ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-l...   101   5e-20
ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i...   100   2e-19

>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/61 (78%), Positives = 57/61 (93%)
 Frame = -1

Query: 314 RIVSAKVYLDRATGVSKCFGFVSYDSPAAAQTAINMMNGCQLGGKKLKVEHKRENKQNNA 135
           +++SAKV++D+ATGVSKCFGFVSYDSP AAQTAINMMNGCQLGGKKLKV+ KR+NKQ+  
Sbjct: 376 KVLSAKVFVDKATGVSKCFGFVSYDSPTAAQTAINMMNGCQLGGKKLKVQLKRDNKQSKP 435

Query: 134 Y 132
           Y
Sbjct: 436 Y 436


>gb|AFK43647.1| unknown [Medicago truncatula]
          Length = 218

 Score =  104 bits (260), Expect = 6e-21
 Identities = 47/61 (77%), Positives = 56/61 (91%)
 Frame = -1

Query: 314 RIVSAKVYLDRATGVSKCFGFVSYDSPAAAQTAINMMNGCQLGGKKLKVEHKRENKQNNA 135
           R++SAKV++D+ATGVSKCFGFVSYDSP AAQ+AI+MMNGCQLGGKKLKV+HKR+NK    
Sbjct: 158 RVLSAKVFVDKATGVSKCFGFVSYDSPEAAQSAISMMNGCQLGGKKLKVQHKRDNKPGKP 217

Query: 134 Y 132
           Y
Sbjct: 218 Y 218


>ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-like [Glycine max]
          Length = 429

 Score =  101 bits (252), Expect = 5e-20
 Identities = 46/61 (75%), Positives = 56/61 (91%)
 Frame = -1

Query: 314 RIVSAKVYLDRATGVSKCFGFVSYDSPAAAQTAINMMNGCQLGGKKLKVEHKRENKQNNA 135
           R++SAKV++D+ATGVSKCFGFVSYD+P AAQ+AI+MMNGCQLGGKKLKV+ KR+NKQ   
Sbjct: 369 RVLSAKVFVDKATGVSKCFGFVSYDTPEAAQSAISMMNGCQLGGKKLKVQLKRDNKQGKP 428

Query: 134 Y 132
           Y
Sbjct: 429 Y 429


>ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
          Length = 431

 Score =  101 bits (252), Expect = 5e-20
 Identities = 46/61 (75%), Positives = 56/61 (91%)
 Frame = -1

Query: 314 RIVSAKVYLDRATGVSKCFGFVSYDSPAAAQTAINMMNGCQLGGKKLKVEHKRENKQNNA 135
           R++SAKV++D+ATGVSKCFGFVSYD+P AAQ+AI+MMNGCQLGGKKLKV+ KR+NKQ   
Sbjct: 371 RVLSAKVFVDKATGVSKCFGFVSYDTPEAAQSAISMMNGCQLGGKKLKVQLKRDNKQGKP 430

Query: 134 Y 132
           Y
Sbjct: 431 Y 431


>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
           vinifera]
          Length = 447

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/62 (75%), Positives = 57/62 (91%), Gaps = 1/62 (1%)
 Frame = -1

Query: 314 RIVSAKVYLDRATGVSKCFGFVSYDSPAAAQTAINMMNGCQLGGKKLKVEHKRE-NKQNN 138
           R++SAKV++D+ATG SKCFGFVSYDSPA+AQ+AI+MMNGCQLGGKKLKV+ KR+ NKQN 
Sbjct: 386 RVLSAKVFVDKATGASKCFGFVSYDSPASAQSAISMMNGCQLGGKKLKVQLKRDNNKQNK 445

Query: 137 AY 132
            Y
Sbjct: 446 PY 447


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