BLASTX nr result

ID: Lithospermum22_contig00035698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035698
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat...    68   7e-10
emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]    68   7e-10

>ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
           gi|296085293|emb|CBI29025.3| unnamed protein product
           [Vitis vinifera]
          Length = 854

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
 Frame = +1

Query: 19  VSKLHIFNTKTR----------MFISKQMLTKRTVSLISIPFSRIPFCTNASSSSVMEDS 168
           ++K H F   TR           F +++ L  + +S  S  F R+  CT +S+S      
Sbjct: 6   ITKPHSFIKSTRPISQVPLIQLFFYTQKSLFTQNLSTFS-QFLRL-ICTKSSASFSSPHG 63

Query: 169 KQIVDTLISIFPKRPQNEEQNQQLKDLGLMITANIVENALKGFKNWKIAQEFFYW 333
             I + LISIF K+P N + NQ+L++ G M+T  +VEN L G K+WKIA  FF W
Sbjct: 64  AHITNALISIFTKQPFNPD-NQELRNFGSMLTHEVVENVLSGLKSWKIAYRFFNW 117


>emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
 Frame = +1

Query: 19  VSKLHIFNTKTR----------MFISKQMLTKRTVSLISIPFSRIPFCTNASSSSVMEDS 168
           ++K H F   TR           F +++ L  + +S  S  F R+  CT +S+S      
Sbjct: 6   ITKPHSFIKSTRPISQVPLIQLFFYTQKSLFTQNLSTFS-QFLRL-ICTKSSASFSSPHG 63

Query: 169 KQIVDTLISIFPKRPQNEEQNQQLKDLGLMITANIVENALKGFKNWKIAQEFFYW 333
             I + LISIF K+P N + NQ+L++ G M+T  +VEN L G K+WKIA  FF W
Sbjct: 64  AHITNALISIFTKQPFNPD-NQELRNFGSMLTHEVVENVLSGLKSWKIAYRFFNW 117


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