BLASTX nr result

ID: Lithospermum22_contig00035685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035685
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   119   3e-25
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   116   2e-24
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]   114   6e-24
emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]   114   8e-24
emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]   111   5e-23

>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/107 (54%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
 Frame = +3

Query: 3   PPIWMNDYIIGEELSEDEANMVQDMG---EEDPFTYHEATQHKKWRDAMDAEIESIVKNN 173
           PP WM DY  G  LS++E+  +  +    + DP TY +A + +KWR AM+ EIE+I +NN
Sbjct: 546 PPTWMQDYETGAGLSDEESVNLAQLALFTDSDPTTYDDAVRSEKWRLAMNQEIEAIERNN 605

Query: 174 TWTLTNLPEGSKRI*VKWIFKTKKDEGGNIIKWKARLVAKDYSQKYG 314
           TW LT+LP G K I VKWIFKTK +E G + K+KARLVAK YSQ+YG
Sbjct: 606 TWELTDLPSGGKTIGVKWIFKTKLNENGEVDKYKARLVAKGYSQQYG 652


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/106 (52%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
 Frame = +3

Query: 6   PIWMNDYIIGEELSEDEA---NMVQDMGEEDPFTYHEATQHKKWRDAMDAEIESIVKNNT 176
           PIWM  Y+ GE LSE+E    N+      +DP ++ EA  H +WR+AM AEIE+I  N+T
Sbjct: 645 PIWMQGYVSGEGLSEEEQELHNLAVFTPSDDPSSFEEAVVHSRWREAMRAEIEAIETNDT 704

Query: 177 WTLTNLPEGSKRI*VKWIFKTKKDEGGNIIKWKARLVAKDYSQKYG 314
           W LT+LP+G K+I VKW+FKTK +E G + K KARLVAK Y+Q++G
Sbjct: 705 WQLTSLPKGVKKIGVKWVFKTKYNEHGKVDKCKARLVAKGYAQQFG 750


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/106 (52%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
 Frame = +3

Query: 3    PPIWMNDYIIGEELSED--EANMVQDMGEEDPFTYHEATQHKKWRDAMDAEIESIVKNNT 176
            PP WM DY IGE LSE+  EA++       DP  + +A + +KW+ AMD E+ +I KN T
Sbjct: 752  PPAWMRDYDIGEGLSEEDNEAHLAM-FAAADPIHFEDAVKSEKWKKAMDLELAAINKNGT 810

Query: 177  WTLTNLPEGSKRI*VKWIFKTKKDEGGNIIKWKARLVAKDYSQKYG 314
            W LT LPEG K+I VKWI+KTK +E G + K+KARLVAK Y+Q++G
Sbjct: 811  WELTELPEGGKKIGVKWIYKTKFNENGEVDKYKARLVAKGYTQQHG 856


>emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]
          Length = 1246

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/104 (55%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
 Frame = +3

Query: 6    PIWMNDYIIGEELSEDEANMVQDM-GEEDPFTYHEATQHKKWRDAMDAEIESIVKNNTWT 182
            PIWM DYI G+ LSE E  +   +    DP  Y E     KWR AMD+EI SI KN TW 
Sbjct: 722  PIWMEDYISGKGLSEGEIELNMALVASTDPINYEEVVMSSKWRLAMDSEINSIEKNQTWK 781

Query: 183  LTNLPEGSKRI*VKWIFKTKKDEGGNIIKWKARLVAKDYSQKYG 314
            LT+LP G+K I VKWI+KTK +E G + K+KARLVAK YSQ+ G
Sbjct: 782  LTDLPTGAKTIGVKWIYKTKLNELGEVDKYKARLVAKGYSQQQG 825


>emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]
          Length = 972

 Score =  111 bits (278), Expect = 5e-23
 Identities = 58/103 (56%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
 Frame = +3

Query: 9   IWMNDYIIGEELSEDEANMVQDM-GEEDPFTYHEATQHKKWRDAMDAEIESIVKNNTWTL 185
           IWM DYI GE LSE E  +   +     P  Y EA    KWR AMD+EI SI KN TW L
Sbjct: 542 IWMEDYISGERLSEGEIELNMALVASTYPINYEEAXMSSKWRLAMDSEINSIEKNQTWKL 601

Query: 186 TNLPEGSKRI*VKWIFKTKKDEGGNIIKWKARLVAKDYSQKYG 314
           T+LP G+K I VKWI+KTK +E G + K+KARLVAK YSQ+ G
Sbjct: 602 TDLPAGAKTIGVKWIYKTKLNELGEVDKYKARLVAKGYSQQQG 644


Top