BLASTX nr result

ID: Lithospermum22_contig00035684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035684
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74050.1| hypothetical protein VITISV_040588 [Vitis vinifera]   106   2e-21
emb|CAN75114.1| hypothetical protein VITISV_001420 [Vitis vinifera]   103   1e-20
emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]   103   2e-20
gb|AAY87199.1| reverse transcriptase [Ephedra distachya]              100   2e-19
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...    99   3e-19

>emb|CAN74050.1| hypothetical protein VITISV_040588 [Vitis vinifera]
          Length = 1067

 Score =  106 bits (264), Expect = 2e-21
 Identities = 48/74 (64%), Positives = 61/74 (82%)
 Frame = -3

Query: 223 QKEGIDFNEVFAPVARLDTVRMIISLAAYKKWKIFQLDVKSTFLQGDL*KDVYVDQPPGY 44
           Q++G+DF E++APVAR+DTVRMI++LAA + W I+QLDVKS FL G+L +DVYVDQP GY
Sbjct: 654 QQQGVDFTEIYAPVARMDTVRMIVALAAQRGWTIYQLDVKSAFLHGELSEDVYVDQPKGY 713

Query: 43  VQAGE*HLVYKLHK 2
            + G  H VYKLHK
Sbjct: 714 EKKGSEHKVYKLHK 727


>emb|CAN75114.1| hypothetical protein VITISV_001420 [Vitis vinifera]
          Length = 1095

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/74 (63%), Positives = 60/74 (81%)
 Frame = -3

Query: 223 QKEGIDFNEVFAPVARLDTVRMIISLAAYKKWKIFQLDVKSTFLQGDL*KDVYVDQPPGY 44
           Q++G+DF E++APVAR+D VRMI++LAA + W I+QLDVKS FL G+L +DVYVDQP GY
Sbjct: 723 QQQGVDFTEIYAPVARMDXVRMIVALAAQRGWTIYQLDVKSAFLHGELSEDVYVDQPKGY 782

Query: 43  VQAGE*HLVYKLHK 2
            + G  H VYKLHK
Sbjct: 783 EKKGNEHKVYKLHK 796


>emb|CAN72600.1| hypothetical protein VITISV_036712 [Vitis vinifera]
          Length = 1246

 Score =  103 bits (256), Expect = 2e-20
 Identities = 46/74 (62%), Positives = 60/74 (81%)
 Frame = -3

Query: 223  QKEGIDFNEVFAPVARLDTVRMIISLAAYKKWKIFQLDVKSTFLQGDL*KDVYVDQPPGY 44
            Q++G+DF +++APVAR+DTVRMI++L A + W I+QLDVKS FL G+L +DVYVDQP GY
Sbjct: 822  QQQGVDFTKIYAPVARMDTVRMIVALTAQRGWTIYQLDVKSAFLNGELNEDVYVDQPKGY 881

Query: 43   VQAGE*HLVYKLHK 2
             + G  H VYKLHK
Sbjct: 882  EKKGSEHKVYKLHK 895


>gb|AAY87199.1| reverse transcriptase [Ephedra distachya]
          Length = 135

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/74 (63%), Positives = 59/74 (79%)
 Frame = -3

Query: 223 QKEGIDFNEVFAPVARLDTVRMIISLAAYKKWKIFQLDVKSTFLQGDL*KDVYVDQPPGY 44
           QK G+DF+EVFAPVARLDT+RMI++LAA++ W+I  LDVKS FL GDL ++VYV QP G+
Sbjct: 3   QKHGVDFDEVFAPVARLDTIRMILALAAHRGWEIHHLDVKSAFLNGDLEEEVYVSQPEGF 62

Query: 43  VQAGE*HLVYKLHK 2
           V   E H VY+L K
Sbjct: 63  VVKAEEHKVYRLSK 76


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1409

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/74 (59%), Positives = 62/74 (83%)
 Frame = -3

Query: 223  QKEGIDFNEVFAPVARLDTVRMIISLAAYKKWKIFQLDVKSTFLQGDL*KDVYVDQPPGY 44
            QK+G+DF EVFAPVARLDTVR+++++AA ++W++  LDVKS FL G+L ++VYV QP G+
Sbjct: 968  QKQGVDFEEVFAPVARLDTVRVVLAVAADRRWQVHHLDVKSAFLNGELEEEVYVAQPEGF 1027

Query: 43   VQAGE*HLVYKLHK 2
             ++G+ HLV KLHK
Sbjct: 1028 ARSGKEHLVLKLHK 1041


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