BLASTX nr result

ID: Lithospermum22_contig00035669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035669
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF49717.1| putative centromeric histone H3-like protein_1 [...    76   3e-12
dbj|BAF49730.1| centromeric histone H3-like protein-1 [Eruca sat...    76   3e-12
gb|AAT96389.1| centromeric histone [Olimarabidopsis pumila] gi|1...    76   3e-12
dbj|BAC79432.1| histone H3 like protein [Turritis glabra]              75   4e-12
ref|XP_002281073.1| PREDICTED: histone H3-like centromeric prote...    75   5e-12

>dbj|BAF49717.1| putative centromeric histone H3-like protein_1 [Olimarabidopsis
           pumila]
          Length = 173

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = -3

Query: 415 EDYLVALFNESMLCAIHAKRVTLMKKDFELARRIGGKGQLW 293
           EDYLV LF++SMLCAIHAKRVTLM+KDFELARR+GGKG+ W
Sbjct: 133 EDYLVGLFSDSMLCAIHAKRVTLMRKDFELARRLGGKGRPW 173


>dbj|BAF49730.1| centromeric histone H3-like protein-1 [Eruca sativa]
          Length = 164

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = -3

Query: 415 EDYLVALFNESMLCAIHAKRVTLMKKDFELARRIGGKGQLW 293
           EDYLV LF++SMLCAIHAKRVTLM+KDFELARR+GGKG+ W
Sbjct: 124 EDYLVGLFSDSMLCAIHAKRVTLMRKDFELARRLGGKGRPW 164


>gb|AAT96389.1| centromeric histone [Olimarabidopsis pumila]
           gi|134152505|dbj|BAF49718.1| putative centromeric
           histone H3-like protein_2 [Olimarabidopsis pumila]
          Length = 174

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = -3

Query: 415 EDYLVALFNESMLCAIHAKRVTLMKKDFELARRIGGKGQLW 293
           EDYLV LF++SMLCAIHAKRVTLM+KDFELARR+GGKG+ W
Sbjct: 134 EDYLVGLFSDSMLCAIHAKRVTLMRKDFELARRLGGKGRPW 174


>dbj|BAC79432.1| histone H3 like protein [Turritis glabra]
          Length = 174

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = -3

Query: 415 EDYLVALFNESMLCAIHAKRVTLMKKDFELARRIGGKGQLW 293
           EDYLV LF++SMLCAIHA+RVTLM+KDFELARRIGGKG+ W
Sbjct: 134 EDYLVGLFSDSMLCAIHARRVTLMRKDFELARRIGGKGRPW 174


>ref|XP_002281073.1| PREDICTED: histone H3-like centromeric protein HTR12 [Vitis
           vinifera] gi|297745416|emb|CBI40496.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = -3

Query: 415 EDYLVALFNESMLCAIHAKRVTLMKKDFELARRIGGKGQLW 293
           EDYLV LF ++MLCAIHAKRVTLMKKD+ELARRIGGKGQ W
Sbjct: 116 EDYLVHLFEDAMLCAIHAKRVTLMKKDWELARRIGGKGQPW 156


Top