BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035622
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_179197.1| pentatricopeptide repeat-containing protein [Ar...    98   8e-19
ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...    88   6e-16
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_002519113.1| pentatricopeptide repeat-containing protein,...    80   2e-13

>ref|NP_179197.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75267579|sp|Q9XIM8.1|PP155_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g15980 gi|5306237|gb|AAD41970.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251359|gb|AEC06453.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 498

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/81 (60%), Positives = 64/81 (79%)
 Frame = +2

Query: 140 SPPELNDPIITNSVSILKHHRSKSRWSHLRTTTPPTGFTPSQVSQITLQLRNSPHLAFRF 319
           SPP  +DP+I+++VSIL HHRSKSRWS LR+  P +GFTPSQ S+ITL LRN+PHL+ RF
Sbjct: 35  SPP--SDPLISDAVSILTHHRSKSRWSTLRSLQP-SGFTPSQFSEITLCLRNNPHLSLRF 91

Query: 320 FHFTLQHSLCDHTISTYATII 382
           F FT ++SLC H   + +T+I
Sbjct: 92  FLFTRRYSLCSHDTHSCSTLI 112


>ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|222849039|gb|EEE86586.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/84 (55%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
 Frame = +2

Query: 143 PPELNDPIITNSVSILKHHRSKSRWSHLR---TTTPPTGFTPSQVSQITLQLRNSPHLAF 313
           PP  + P+ T  +S+L HHRSKSRWSHLR   TTT  T   P   S ITL+L+++PHLA 
Sbjct: 32  PPNHHSPLTTAIISLLTHHRSKSRWSHLRSLLTTTTSTPLAPGHFSLITLKLKSNPHLAL 91

Query: 314 RFFHFTLQH-SLCDHTISTYATII 382
            FFHFTL + SLC H + +YATII
Sbjct: 92  SFFHFTLHNSSLCSHNLRSYATII 115


>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/73 (56%), Positives = 57/73 (78%)
 Frame = +2

Query: 164 IITNSVSILKHHRSKSRWSHLRTTTPPTGFTPSQVSQITLQLRNSPHLAFRFFHFTLQHS 343
           +I+ +VSIL+H RSKSRWSHL++  P  GFTP++ SQI LQ++N+PHLA  FF +    S
Sbjct: 36  LISTAVSILRHQRSKSRWSHLQSLFPK-GFTPTEASQIVLQIKNNPHLALSFFLWCHHKS 94

Query: 344 LCDHTISTYATII 382
           LC+HT+ +Y+TII
Sbjct: 95  LCNHTLLSYSTII 107


>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Glycine max]
          Length = 487

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/78 (50%), Positives = 59/78 (75%)
 Frame = +2

Query: 149 ELNDPIITNSVSILKHHRSKSRWSHLRTTTPPTGFTPSQVSQITLQLRNSPHLAFRFFHF 328
           + +  ++T++VSIL HHRSKSRWS+LR+  P  G TP++ S+ITL ++N P LA RFF +
Sbjct: 29  DASQSLVTDAVSILTHHRSKSRWSNLRSACP-NGITPAEFSEITLHIKNKPQLALRFFLW 87

Query: 329 TLQHSLCDHTISTYATII 382
           T   SLC+H +++Y++II
Sbjct: 88  TKSKSLCNHNLASYSSII 105


>ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541776|gb|EEF43324.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
 Frame = +2

Query: 140 SPPELNDPIITNSVSILKHHRSKSRWSHLRT--TTPPTGFTPSQVSQITLQLRNSPHLAF 313
           SPP  +  +IT   S+L HHRSKSRW+HLR+   T     TP+  SQI L L+++P LA 
Sbjct: 26  SPPSSDQQLITTITSLLIHHRSKSRWTHLRSLILTSNKTLTPTHFSQIILLLKSNPRLAL 85

Query: 314 RFFHFTLQH-SLCDHTISTYATI 379
           RFFHFTL++ S C H + + +TI
Sbjct: 86  RFFHFTLRNPSFCSHDLRSISTI 108