BLASTX nr result

ID: Lithospermum22_contig00035609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035609
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305655.1| f-box family protein [Populus trichocarpa] g...    78   9e-13
ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002524681.1| conserved hypothetical protein [Ricinus comm...    73   2e-11
ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis ...    69   4e-10
emb|CBI23311.3| unnamed protein product [Vitis vinifera]               69   4e-10

>ref|XP_002305655.1| f-box family protein [Populus trichocarpa]
           gi|222848619|gb|EEE86166.1| f-box family protein
           [Populus trichocarpa]
          Length = 189

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 40/70 (57%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
 Frame = +2

Query: 5   IKEAAMIAKRLHFEYSTPRKTVGFQSAADNE---ELSDIEAPNAPKQSRIRRSVMSRKNL 175
           I+EA +IAK  HF YSTPRK+ GF+S  D E   EL +IEAPNAPKQ R  +S ++RK++
Sbjct: 109 IREATLIAKESHFAYSTPRKSQGFRSPFDLENPGELDEIEAPNAPKQRRSYKSRLNRKSI 168

Query: 176 SDISAALFTS 205
           +D+S ALF S
Sbjct: 169 ADVSVALFAS 178


>ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|222859725|gb|EEE97272.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/70 (52%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
 Frame = +2

Query: 5   IKEAAMIAKRLHFEYSTPRKTVGFQSAAD---NEELSDIEAPNAPKQSRIRRSVMSRKNL 175
           I+EA +IAK  HF YSTPRKT  F++  D      L +IEAPNAPKQ R  +S+++RK++
Sbjct: 109 IREATLIAKEWHFAYSTPRKTQAFRTRIDFGNPSGLDEIEAPNAPKQRRSYKSLLNRKSI 168

Query: 176 SDISAALFTS 205
           +D+S ALF S
Sbjct: 169 ADVSVALFAS 178


>ref|XP_002524681.1| conserved hypothetical protein [Ricinus communis]
           gi|223536042|gb|EEF37700.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
 Frame = +2

Query: 2   SIKEAAMIAKRLHFEYSTPRKTVGFQ----SAADNEELSDIEAPNAPKQSRIRRSVMSRK 169
           +I+EA ++A++LHF YSTPRK   F+    S  +  E  + EAPNAPK SR  +S ++RK
Sbjct: 117 AIREATLVARKLHFAYSTPRKIPAFRTPIASTENPTEFDEFEAPNAPKVSRCYKSRLNRK 176

Query: 170 NLSDISAALFTSDDEETWPREDVLMGME 253
           NL DIS ALF S      PR+ + M  E
Sbjct: 177 NLMDISVALFAS------PRKGLFMETE 198


>ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis vinifera]
          Length = 172

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
 Frame = +2

Query: 2   SIKEAAMIAKRLHFEYSTPRKTVGFQSAADNEELS---DIEAPNAPKQSRIRRSVMSRKN 172
           +I++A +IAK+ HF YSTP K   F+S  D EE S   D++ P+APKQSR  RS +  + 
Sbjct: 99  TIRDATLIAKKSHFAYSTPSKVQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRK 158

Query: 173 LSDISAALFTSDDE 214
           LS I+ ALF+SD+E
Sbjct: 159 LSGIAIALFSSDEE 172


>emb|CBI23311.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/74 (50%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
 Frame = +2

Query: 2   SIKEAAMIAKRLHFEYSTPRKTVGFQSAADNEELS---DIEAPNAPKQSRIRRSVMSRKN 172
           +I++A +IAK+ HF YSTP K   F+S  D EE S   D++ P+APKQSR  RS +  + 
Sbjct: 357 TIRDATLIAKKSHFAYSTPSKVQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRK 416

Query: 173 LSDISAALFTSDDE 214
           LS I+ ALF+SD+E
Sbjct: 417 LSGIAIALFSSDEE 430


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