BLASTX nr result

ID: Lithospermum22_contig00035586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035586
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527667.1| ring finger protein, putative [Ricinus commu...   115   5e-24
ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago trunc...   114   1e-23
ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   112   3e-23
ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   110   2e-22
ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   108   3e-22

>ref|XP_002527667.1| ring finger protein, putative [Ricinus communis]
           gi|223532972|gb|EEF34738.1| ring finger protein,
           putative [Ricinus communis]
          Length = 383

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/102 (56%), Positives = 71/102 (69%)
 Frame = +2

Query: 2   DNSTPTFSPLVIAIIGILASAFLLVSYYAVISKYCKXXXXXXXXXXXXVLDMISDENHND 181
           DNS PTFSPLVIAIIGIL SAFLLVSYY +ISKYC                +   E++++
Sbjct: 51  DNSGPTFSPLVIAIIGILVSAFLLVSYYTIISKYCGNNNNDSARRRENQDQIEELEDNHN 110

Query: 182 PSLHLQWNVSTNGLDEELIKTITMLKYKKEDRCVQETDCSIC 307
           PSLH  W+V+T GLDE LIK+ITM KY+K D  ++ TDCS+C
Sbjct: 111 PSLHEPWHVTTTGLDEALIKSITMCKYRKGDGLIEGTDCSVC 152


>ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago truncatula]
           gi|355514209|gb|AES95832.1| RING-H2 finger protein ATL3A
           [Medicago truncatula]
          Length = 481

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   DNSTPTFSPLVIAIIGILASAFLLVSYYAVISKYCKXXXXXXXXXXXXVLDMISDENHN- 178
           ++S+P FSPLVIAIIGILASAFLLV+YY +ISKYC               +   D +H+ 
Sbjct: 49  EDSSPNFSPLVIAIIGILASAFLLVTYYTIISKYCGRRESSASESREANDEFEDDHHHHH 108

Query: 179 DPSLHLQWNVSTNGLDEELIKTITMLKYKKEDRCVQETDCSIC 307
           +PS+H  W+VSTNGLDE LIK+IT+ KYKK D  V  TDCS+C
Sbjct: 109 NPSIHEPWHVSTNGLDETLIKSITVCKYKKNDGLVDVTDCSVC 151


>ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Vitis
           vinifera]
          Length = 375

 Score =  112 bits (280), Expect = 3e-23
 Identities = 59/102 (57%), Positives = 72/102 (70%)
 Frame = +2

Query: 2   DNSTPTFSPLVIAIIGILASAFLLVSYYAVISKYCKXXXXXXXXXXXXVLDMISDENHND 181
           +NS P FSPLVIAIIGILASAFLLVSYY +ISKYC               ++  ++NHN 
Sbjct: 47  ENSGPNFSPLVIAIIGILASAFLLVSYYTIISKYCGNMERERRENQDINEEL--EDNHN- 103

Query: 182 PSLHLQWNVSTNGLDEELIKTITMLKYKKEDRCVQETDCSIC 307
           P+LH  W+V+T GLDE LIK+IT+ KYKK D  V+ TDCS+C
Sbjct: 104 PALHEPWHVATTGLDEALIKSITLCKYKKGDGLVEGTDCSVC 145


>ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus] gi|449532198|ref|XP_004173069.1| PREDICTED: E3
           ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus]
          Length = 373

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/102 (56%), Positives = 70/102 (68%)
 Frame = +2

Query: 2   DNSTPTFSPLVIAIIGILASAFLLVSYYAVISKYCKXXXXXXXXXXXXVLDMISDENHND 181
           DNS P FSPLVIAIIGILASAFLLV+YY +ISKYC               +   D NHN 
Sbjct: 48  DNSGPHFSPLVIAIIGILASAFLLVTYYTIISKYCGNTNRLSGTGNHDPSEEYED-NHN- 105

Query: 182 PSLHLQWNVSTNGLDEELIKTITMLKYKKEDRCVQETDCSIC 307
           P+ H  W+V+T GLDE LIK+IT+ KYK+ED  V+ +DCS+C
Sbjct: 106 PTFHEPWHVATTGLDEALIKSITVCKYKREDGLVEGSDCSVC 147


>ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 364

 Score =  108 bits (271), Expect = 3e-22
 Identities = 56/102 (54%), Positives = 71/102 (69%)
 Frame = +2

Query: 2   DNSTPTFSPLVIAIIGILASAFLLVSYYAVISKYCKXXXXXXXXXXXXVLDMISDENHND 181
           D+S+P FSPLVIA+IG+L SAFLLVSYY +ISKYC              +++  +E+HN 
Sbjct: 47  DDSSPNFSPLVIAVIGVLVSAFLLVSYYTIISKYCGSRESSQSENHEENVEL--EEDHN- 103

Query: 182 PSLHLQWNVSTNGLDEELIKTITMLKYKKEDRCVQETDCSIC 307
           PSLH  W+  T GLDE LIK+IT+ KYKK D  V+ TDCS+C
Sbjct: 104 PSLHEPWHAPTIGLDEALIKSITVCKYKKGDGLVEVTDCSVC 145


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