BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035533
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    88   6e-16
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...    84   1e-14
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...    82   4e-14
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...    82   4e-14
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...    82   6e-14

>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/60 (70%), Positives = 49/60 (81%)
 Frame = -3

Query: 182 ILNVARALRFQGNLPISFWGESILTAGFLINRTPSSVLHFNTPYELIYEGSPVYSELGVF 3
           ILNVARAL FQ +LPI FWGESILTA +LINRTPSS+L   TPYE+++   PVYS+L VF
Sbjct: 693 ILNVARALLFQASLPIKFWGESILTAAYLINRTPSSILSGRTPYEVLHGSKPVYSQLRVF 752


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/60 (65%), Positives = 48/60 (80%)
 Frame = -3

Query: 182 ILNVARALRFQGNLPISFWGESILTAGFLINRTPSSVLHFNTPYELIYEGSPVYSELGVF 3
           +LNVARALRFQ NLPI FWGE +LTA +LINRTPSSVL+ +TPYE +++  P +  L VF
Sbjct: 556 LLNVARALRFQANLPIQFWGECVLTAAYLINRTPSSVLNDSTPYERLHKKQPRFDHLRVF 615


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 38/60 (63%), Positives = 47/60 (78%)
 Frame = -3

Query: 182 ILNVARALRFQGNLPISFWGESILTAGFLINRTPSSVLHFNTPYELIYEGSPVYSELGVF 3
           ILN+ARALRFQ  LPI FWGE IL+A +LINRTPS +L   +PYE++Y+ +P YS L VF
Sbjct: 456 ILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVF 515


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 38/60 (63%), Positives = 47/60 (78%)
 Frame = -3

Query: 182 ILNVARALRFQGNLPISFWGESILTAGFLINRTPSSVLHFNTPYELIYEGSPVYSELGVF 3
           ILN+ARALRFQ  LPI FWGE IL+A +LINRTPS +L   +PYE++Y+ +P YS L VF
Sbjct: 680 ILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVF 739


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/60 (63%), Positives = 47/60 (78%)
 Frame = -3

Query: 182 ILNVARALRFQGNLPISFWGESILTAGFLINRTPSSVLHFNTPYELIYEGSPVYSELGVF 3
           ILN+ARALRFQ  LPI FWGE IL+A +LINRTPS +L   +PYE++Y+ +P YS L VF
Sbjct: 456 ILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPNYSHLRVF 515