BLASTX nr result

ID: Lithospermum22_contig00035516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035516
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-...   153   1e-35
emb|CBI37456.3| unnamed protein product [Vitis vinifera]              152   3e-35
ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...   152   3e-35
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]   150   1e-34
ref|XP_002304377.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33

>ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 861

 Score =  153 bits (387), Expect = 1e-35
 Identities = 71/99 (71%), Positives = 84/99 (84%)
 Frame = +2

Query: 2   ADQFYNQIEQGKVYMISKGSVRPAQKNYNHLCNDYEIFLENTSVIQPCFEDDNLVPKTKF 181
           ADQFYNQIE GKVY ISKGS++PAQKN+NHL NDYEIFLENTS IQPCFEDD  +P+ +F
Sbjct: 325 ADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLENTSTIQPCFEDDQSIPQQQF 384

Query: 182 RFRSISEIQGIEKESVVDVIGVVFSISPSVSILRKNGTE 298
            F  I EI+G++  SVVDVIGVV SI+P+ S++RKNGTE
Sbjct: 385 HFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTE 423


>emb|CBI37456.3| unnamed protein product [Vitis vinifera]
          Length = 754

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/99 (71%), Positives = 86/99 (86%)
 Frame = +2

Query: 2   ADQFYNQIEQGKVYMISKGSVRPAQKNYNHLCNDYEIFLENTSVIQPCFEDDNLVPKTKF 181
           ADQFYNQIE GKVY+ISKGS++PAQK +NHL ND+EIFLE+TS IQPCF+DDN +P+ +F
Sbjct: 191 ADQFYNQIETGKVYLISKGSLKPAQKTFNHLRNDHEIFLESTSTIQPCFDDDNSIPRQQF 250

Query: 182 RFRSISEIQGIEKESVVDVIGVVFSISPSVSILRKNGTE 298
            FRSIS+++ +E  SVVDVIGVV  ISPS SI+RKNGTE
Sbjct: 251 HFRSISDVESMENNSVVDVIGVVSFISPSASIMRKNGTE 289


>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Vitis vinifera]
          Length = 882

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/99 (71%), Positives = 86/99 (86%)
 Frame = +2

Query: 2   ADQFYNQIEQGKVYMISKGSVRPAQKNYNHLCNDYEIFLENTSVIQPCFEDDNLVPKTKF 181
           ADQFYNQIE GKVY+ISKGS++PAQK +NHL ND+EIFLE+TS IQPCF+DDN +P+ +F
Sbjct: 329 ADQFYNQIETGKVYLISKGSLKPAQKTFNHLRNDHEIFLESTSTIQPCFDDDNSIPRQQF 388

Query: 182 RFRSISEIQGIEKESVVDVIGVVFSISPSVSILRKNGTE 298
            FRSIS+++ +E  SVVDVIGVV  ISPS SI+RKNGTE
Sbjct: 389 HFRSISDVESMENNSVVDVIGVVSFISPSASIMRKNGTE 427


>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
          Length = 882

 Score =  150 bits (379), Expect = 1e-34
 Identities = 70/99 (70%), Positives = 85/99 (85%)
 Frame = +2

Query: 2   ADQFYNQIEQGKVYMISKGSVRPAQKNYNHLCNDYEIFLENTSVIQPCFEDDNLVPKTKF 181
           ADQFYNQIE GKVY+ISKGS++PAQK +NHL ND+EIFLE+TS IQPCF+DDN +P+ +F
Sbjct: 329 ADQFYNQIETGKVYLISKGSLKPAQKTFNHLRNDHEIFLESTSTIQPCFDDDNSIPRQQF 388

Query: 182 RFRSISEIQGIEKESVVDVIGVVFSISPSVSILRKNGTE 298
            FR IS+++ +E  SVVDVIGVV  ISPS SI+RKNGTE
Sbjct: 389 HFRXISDVESMENNSVVDVIGVVSFISPSASIMRKNGTE 427


>ref|XP_002304377.1| predicted protein [Populus trichocarpa] gi|222841809|gb|EEE79356.1|
           predicted protein [Populus trichocarpa]
          Length = 701

 Score =  147 bits (370), Expect = 1e-33
 Identities = 67/99 (67%), Positives = 86/99 (86%)
 Frame = +2

Query: 2   ADQFYNQIEQGKVYMISKGSVRPAQKNYNHLCNDYEIFLENTSVIQPCFEDDNLVPKTKF 181
           ADQFY+QIE G+VY+ISKG+++PAQKN+NHL +D EIFLE+TS IQPCFEDDN +PK +F
Sbjct: 164 ADQFYHQIEAGRVYLISKGNLKPAQKNFNHLRHDLEIFLESTSTIQPCFEDDNTIPKQQF 223

Query: 182 RFRSISEIQGIEKESVVDVIGVVFSISPSVSILRKNGTE 298
            FR IS+++ +E  SVVDVIGVV SI+P+ S++RKNGTE
Sbjct: 224 HFRPISDVEDMENNSVVDVIGVVTSIAPTTSLMRKNGTE 262


Top