BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035485
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   118   4e-25
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   118   6e-25
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   116   2e-24
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   115   3e-24
emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera]   113   1e-23

>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  118 bits (296), Expect = 4e-25
 Identities = 54/120 (45%), Positives = 79/120 (65%)
 Frame = +2

Query: 68  LQDRHSGNPIGAGERSGGLYYYRRIPAVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAI 247
           +QDR +    G G+R  G + +R +    AV  S  + F+LWHRRLGH SD+I+ L+P  
Sbjct: 251 IQDRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRE 310

Query: 248 RSSSSRKQLDHACTVCPQAKQCRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 427
             SS ++ L++ C  C +AKQ RD+FP+SD R+  +F L+HCD+WGP + P+ +GA YFL
Sbjct: 311 LLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRTPSYSGARYFL 370


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/120 (45%), Positives = 76/120 (63%)
 Frame = +2

Query: 68  LQDRHSGNPIGAGERSGGLYYYRRIPAVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAI 247
           +QDR S   +GAG R GG +++R      +VTV     +ELWH R+GHP+ R++ L+P  
Sbjct: 351 VQDRTSRMVMGAGRRVGGTFHFRSTEIAASVTVKEEKNYELWHSRMGHPAARVVSLIPES 410

Query: 248 RSSSSRKQLDHACTVCPQAKQCRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 427
             S S   L+ AC VC +AKQ R+SFP+S  +    F+L++CDLWGP + P+  GA YFL
Sbjct: 411 SVSVSSTHLNKACDVCHRAKQTRNSFPLSINKTLRIFELIYCDLWGPYRTPSHTGARYFL 470


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/120 (44%), Positives = 78/120 (65%)
 Frame = +2

Query: 68  LQDRHSGNPIGAGERSGGLYYYRRIPAVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAI 247
           +QDR +    G G+R  G + +R +    AV  S  + F+LWHRRLGH SD+I+ L+P  
Sbjct: 251 IQDRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRE 310

Query: 248 RSSSSRKQLDHACTVCPQAKQCRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 427
             SS ++ L++ C  C +AKQ RD+FP+ D R+  +F L+HCD+WGP + P+ +GA YFL
Sbjct: 311 LLSSGKEILENVCDTCMRAKQTRDTFPLRDNRSMDSFQLIHCDVWGPYRTPSYSGARYFL 370


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/120 (43%), Positives = 78/120 (65%)
 Frame = +2

Query: 68  LQDRHSGNPIGAGERSGGLYYYRRIPAVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAI 247
           +QDR S NPIG G+   G+YYY+ +       V    ++ELWHRRLGHPSDR+L  + ++
Sbjct: 348 IQDRTSRNPIGVGKLRNGVYYYKPLQGEKVNAVKVEEKYELWHRRLGHPSDRVLASIHSL 407

Query: 248 RSSSSRKQLDHACTVCPQAKQCRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYFL 427
            ++  +   D+ C  C + KQ R+SF +S++RA   F+L+H D+WGP + P ++GA YFL
Sbjct: 408 GNNVMKGIEDYVCDSCCRGKQVRNSFQLSNKRAFEIFNLIHVDIWGPYRTPTTSGAHYFL 467


>emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera]
          Length = 758

 Score =  113 bits (283), Expect = 1e-23
 Identities = 50/121 (41%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
 Frame = +2

Query: 68  LQDRHSGNPIGAGERSGGLYYYRRIPAVCAVTVSGVSEFELWHRRLGHPSDRILKLVPAI 247
           LQDR+S   IG G++  GLY+ + +  +CA   +G++ +ELWHRR+GHPS R++ L+  +
Sbjct: 212 LQDRNSRMLIGTGKQCEGLYFLKGVALICAYETTGIASYELWHRRMGHPSSRVVDLIYEV 271

Query: 248 RSSSSRKQLDHA-CTVCPQAKQCRDSFPISDRRASTAFDLLHCDLWGPNKLPASNGAVYF 424
            S      + +  C +C +A+Q R+ F  SD +    FDL+HCDLWG  ++P S G +YF
Sbjct: 272 DSVGGNDGVKNKFCDICFRAQQTREVFFSSDNKVKECFDLIHCDLWGAYRVPTSCGGIYF 331

Query: 425 L 427
           L
Sbjct: 332 L 332