BLASTX nr result

ID: Lithospermum22_contig00035428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035428
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    62   7e-08
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi...    61   2e-07
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]    60   5e-07
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...    59   8e-07
ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212...    59   8e-07

>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 40/97 (41%), Positives = 53/97 (54%)
 Frame = +3

Query: 3   SQVPILHIGSIKLSNTLTLHNVLHIPSFHYNLSSVNSLTKQEHFNVHFDNQFCYLQDLYQ 182
           S V I  IG IKL++ LTL NVL+IP F  NL SV+  TK     ++FD   C +QD  +
Sbjct: 480 SNVKIAGIGVIKLNSNLTLKNVLYIPEFRLNLLSVSQQTKDMKCKIYFDEDCCVIQDPIK 539

Query: 183 KVHSVVGRISNGLYIFVVGLYIFDTSSFANECVGPSI 293
           +    +GR +      + GLY+ DTSS   EC    I
Sbjct: 540 E--QKIGRGNQ-----IGGLYVLDTSSV--ECTSVDI 567


>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
           gi|7267797|emb|CAB81200.1| putative retrotransposon
           polyprotein [Arabidopsis thaliana]
          Length = 1203

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/75 (41%), Positives = 46/75 (61%)
 Frame = +3

Query: 3   SQVPILHIGSIKLSNTLTLHNVLHIPSFHYNLSSVNSLTKQEHFNVHFDNQFCYLQDLYQ 182
           ++V I H G+I +++TL LHNVL +P F +NL SV  L K   ++ HF    CY+Q+L +
Sbjct: 133 TRVAITHTGTICITSTLILHNVLLVPDFKFNLISVCCLVKTLSYSAHFFADCCYIQELTR 192

Query: 183 KVHSVVGRISNGLYI 227
            +    G+  N LYI
Sbjct: 193 GLMIGRGKTYNNLYI 207


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 30/75 (40%), Positives = 47/75 (62%)
 Frame = +3

Query: 3   SQVPILHIGSIKLSNTLTLHNVLHIPSFHYNLSSVNSLTKQEHFNVHFDNQFCYLQDLYQ 182
           +++PI  IG+I LS  L L +VL+IP+F +NL S+++LT+   F+  F   FC++QD  Q
Sbjct: 408 TKIPITGIGTIHLSPHLVLEHVLYIPTFQFNLISISALTQTNCFSFDFTAHFCFIQDHSQ 467

Query: 183 KVHSVVGRISNGLYI 227
                +GR    LY+
Sbjct: 468 GKLIGMGRRQGNLYL 482


>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 28/75 (37%), Positives = 46/75 (61%)
 Frame = +3

Query: 3    SQVPILHIGSIKLSNTLTLHNVLHIPSFHYNLSSVNSLTKQEHFNVHFDNQFCYLQDLYQ 182
            +++ + HIG + +SN L L +VL+IP F YNL SV++L K + F + F +  C +QD + 
Sbjct: 1698 TRLKVEHIGDVFISNDLVLKDVLYIPDFKYNLLSVSTLLKDDKFAISFADSNCLIQDKWL 1757

Query: 183  KVHSVVGRISNGLYI 227
                    ++NGLY+
Sbjct: 1758 LKTIGKAELTNGLYL 1772


>ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212632 [Cucumis sativus]
           gi|449449869|ref|XP_004142687.1| PREDICTED:
           uncharacterized protein LOC101213831 [Cucumis sativus]
          Length = 440

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 28/75 (37%), Positives = 46/75 (61%)
 Frame = +3

Query: 3   SQVPILHIGSIKLSNTLTLHNVLHIPSFHYNLSSVNSLTKQEHFNVHFDNQFCYLQDLYQ 182
           +++ + HIG + +SN L L +VL+IP F YNL SV++L K + F + F +  C +QD + 
Sbjct: 354 TRLKVEHIGDVFISNDLVLKDVLYIPDFKYNLLSVSTLLKDDKFAISFADSNCLIQDKWL 413

Query: 183 KVHSVVGRISNGLYI 227
                   ++NGLY+
Sbjct: 414 LKTIGKAELTNGLYL 428


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