BLASTX nr result

ID: Lithospermum22_contig00035415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035415
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...    89   5e-16
ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|NP_174294.1| Intron maturase, type II-like protein [Arabidop...    86   4e-15
ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial pro...    82   5e-14
ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    80   1e-13

>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
           gi|223541113|gb|EEF42669.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 681

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/67 (64%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = -2

Query: 199 WGKTFSEPKKT-FKNLSGFLSKKELWVLAYQRTSAHLKGTFPPRNALHSHTLQQIYSLQH 23
           W K+FS P  T F NL+GFLSK +LWVLAYQR+ A + GTFPPRNALHS TL  + SLQ+
Sbjct: 48  WVKSFSSPPNTTFPNLTGFLSKLDLWVLAYQRSCAQVTGTFPPRNALHSQTLHSLLSLQN 107

Query: 22  AVLNNYF 2
           AV++N F
Sbjct: 108 AVVHNRF 114


>ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|222848302|gb|EEE85849.1|
           predicted protein [Populus trichocarpa]
          Length = 623

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/67 (61%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
 Frame = -2

Query: 199 WGKTFSEPKK-TFKNLSGFLSKKELWVLAYQRTSAHLKGTFPPRNALHSHTLQQIYSLQH 23
           W K+FS P   TF NL+GFLSK +LW LAYQR+ AH+ G FPPRNAL SH L  ++SLQ 
Sbjct: 18  WVKSFSSPSNFTFSNLTGFLSKLDLWALAYQRSCAHVTGKFPPRNALPSHALHSLFSLQT 77

Query: 22  AVLNNYF 2
           AV++N F
Sbjct: 78  AVVHNRF 84


>ref|NP_174294.1| Intron maturase, type II-like protein [Arabidopsis thaliana]
           gi|12324175|gb|AAG52062.1|AC022455_16 unknown protein;
           35070-37205 [Arabidopsis thaliana]
           gi|332193046|gb|AEE31167.1| Intron maturase, type
           II-like protein [Arabidopsis thaliana]
          Length = 711

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
 Frame = -2

Query: 199 WGKTFSEPKK-TFKNLSGFLSKKELWVLAYQRTSAHLKGTFPPRNALHSHTLQQIYSLQH 23
           W K+FS P   TF NL+GFLSK +LWVLAYQRT AH+ GTFPPRNA+H++ L+ + SLQ+
Sbjct: 65  WVKSFSSPPSATFSNLTGFLSKFDLWVLAYQRTCAHVTGTFPPRNAIHANALRSLLSLQN 124

Query: 22  AV 17
           AV
Sbjct: 125 AV 126


>ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Glycine max]
          Length = 686

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/66 (56%), Positives = 48/66 (72%)
 Frame = -2

Query: 199 WGKTFSEPKKTFKNLSGFLSKKELWVLAYQRTSAHLKGTFPPRNALHSHTLQQIYSLQHA 20
           W KTFS    +F NL+GFLS  +LW+LAYQR+ AH  GTFPPRNA+H+  L  + SL++A
Sbjct: 54  WVKTFSSSTTSFPNLTGFLSNFDLWLLAYQRSCAHATGTFPPRNAVHATVLHSLLSLRNA 113

Query: 19  VLNNYF 2
           V+ N F
Sbjct: 114 VIRNRF 119


>ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 697

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
 Frame = -2

Query: 199 WGKTFSE-PKKTFKNLSGFLSKKELWVLAYQRTSAHLKGTFPPRNALHSHTLQQIYSLQH 23
           W K F+  P  +F +LS FLSK +LWVLAYQR+ A L G FPPRNA+HSH L+ + SL++
Sbjct: 72  WLKAFASLPNSSFSHLSSFLSKFDLWVLAYQRSCADLTGNFPPRNAIHSHVLRDLLSLRN 131

Query: 22  AVLNNYF 2
           AV+N  F
Sbjct: 132 AVINGKF 138


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