BLASTX nr result

ID: Lithospermum22_contig00035370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035370
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446019.1| hypothetical protein SORBIDRAFT_06g000572 [S...    61   1e-07
gb|AAO00696.1| retrotransposon protein, putative, unclassified [...    57   1e-06
ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [S...    54   1e-06
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   2e-06
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...    51   3e-06

>ref|XP_002446019.1| hypothetical protein SORBIDRAFT_06g000572 [Sorghum bicolor]
           gi|241937202|gb|EES10347.1| hypothetical protein
           SORBIDRAFT_06g000572 [Sorghum bicolor]
          Length = 385

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/75 (40%), Positives = 47/75 (62%)
 Frame = -3

Query: 227 GQLERSISVINTPF**DIKQYFGPCFNEEEIKKCVFSMNGNKAPGPDGIPALFFQHY*NI 48
           G +ER ++V       ++ Q     F+ EE+KK +FS+   KAPGPDG+ A+FF+ + N+
Sbjct: 280 GDVERKVTV-------EMNQLLMAPFSREEVKKALFSIGDLKAPGPDGLHAIFFKRFWNM 332

Query: 47  VGTDICNMVLSYLNN 3
           +G D+ N VL  +NN
Sbjct: 333 LGDDLINEVLLAINN 347


>gb|AAO00696.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|31433141|gb|AAP54694.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 563

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/49 (46%), Positives = 35/49 (71%)
 Frame = -3

Query: 152 FNEEEIKKCVFSMNGNKAPGPDGIPALFFQHY*NIVGTDICNMVLSYLN 6
           F E+EIKK +F M  NKAPGPDG PA F+Q + N++ +D+ ++ + + N
Sbjct: 201 FTEDEIKKAIFQMEHNKAPGPDGFPAEFYQVFWNVIKSDLLDLFIEFHN 249


>ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [Sorghum bicolor]
           gi|241918649|gb|EER91793.1| hypothetical protein
           SORBIDRAFT_01g026845 [Sorghum bicolor]
          Length = 295

 Score = 53.9 bits (128), Expect(2) = 1e-06
 Identities = 24/50 (48%), Positives = 33/50 (66%)
 Frame = -3

Query: 152 FNEEEIKKCVFSMNGNKAPGPDGIPALFFQHY*NIVGTDICNMVLSYLNN 3
           F  EE+KK +FS+   KAPGPDG+ A+FF+ + N V  D+   VL  +NN
Sbjct: 223 FTREEVKKALFSIGDLKAPGPDGLHAIFFKRFWNFVEDDLVEEVLGAINN 272



 Score = 23.1 bits (48), Expect(2) = 1e-06
 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = -1

Query: 331 ITSIEDEMGVCHQDLAKIHKVAVLFYTILFTSQ----DRGNLSGVSRL*THHFDE 179
           +  + D+ G+ H+D+  +  +   ++  LFT +    + G L+ V R  T+  ++
Sbjct: 163 VKGLVDDQGIFHEDIDTMGTMVKDYFGTLFTREVLDVEDGVLNDVDRRVTNEMNQ 217


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/50 (48%), Positives = 34/50 (68%)
 Frame = -3

Query: 152 FNEEEIKKCVFSMNGNKAPGPDGIPALFFQHY*NIVGTDICNMVLSYLNN 3
           F  EE+   +  M+ NKAPGPDG+ ALF+QH+ + +G D+   VL+ LNN
Sbjct: 437 FRREEVSAALAQMHPNKAPGPDGMNALFYQHFWDTIGEDVTTKVLNMLNN 486


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score = 50.8 bits (120), Expect(2) = 3e-06
 Identities = 21/39 (53%), Positives = 29/39 (74%)
 Frame = -3

Query: 149 NEEEIKKCVFSMNGNKAPGPDGIPALFFQHY*NIVGTDI 33
           N+EE+K  VFS+N +KAPGPDG  A F+  Y +I+ TD+
Sbjct: 324 NDEEVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTDV 362



 Score = 25.0 bits (53), Expect(2) = 3e-06
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = -1

Query: 331 ITSIEDEMGVCHQDLAKIHKVAVLFYTILFTSQDRGNLSGVSRL*THHFDEISNNILDR 155
           +T +ED  GV   +  +I ++   ++  +FTS+  G+ S V         +  N+ L R
Sbjct: 263 LTVMEDINGVAQHEEHQISQIISGYFQQIFTSESDGDFSVVDEAIEPMVSQGDNDFLTR 321


Top