BLASTX nr result
ID: Lithospermum22_contig00035370
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00035370 (331 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002446019.1| hypothetical protein SORBIDRAFT_06g000572 [S... 61 1e-07 gb|AAO00696.1| retrotransposon protein, putative, unclassified [... 57 1e-06 ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [S... 54 1e-06 emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 57 2e-06 gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 51 3e-06 >ref|XP_002446019.1| hypothetical protein SORBIDRAFT_06g000572 [Sorghum bicolor] gi|241937202|gb|EES10347.1| hypothetical protein SORBIDRAFT_06g000572 [Sorghum bicolor] Length = 385 Score = 60.8 bits (146), Expect = 1e-07 Identities = 30/75 (40%), Positives = 47/75 (62%) Frame = -3 Query: 227 GQLERSISVINTPF**DIKQYFGPCFNEEEIKKCVFSMNGNKAPGPDGIPALFFQHY*NI 48 G +ER ++V ++ Q F+ EE+KK +FS+ KAPGPDG+ A+FF+ + N+ Sbjct: 280 GDVERKVTV-------EMNQLLMAPFSREEVKKALFSIGDLKAPGPDGLHAIFFKRFWNM 332 Query: 47 VGTDICNMVLSYLNN 3 +G D+ N VL +NN Sbjct: 333 LGDDLINEVLLAINN 347 >gb|AAO00696.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] gi|31433141|gb|AAP54694.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 563 Score = 57.4 bits (137), Expect = 1e-06 Identities = 23/49 (46%), Positives = 35/49 (71%) Frame = -3 Query: 152 FNEEEIKKCVFSMNGNKAPGPDGIPALFFQHY*NIVGTDICNMVLSYLN 6 F E+EIKK +F M NKAPGPDG PA F+Q + N++ +D+ ++ + + N Sbjct: 201 FTEDEIKKAIFQMEHNKAPGPDGFPAEFYQVFWNVIKSDLLDLFIEFHN 249 >ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [Sorghum bicolor] gi|241918649|gb|EER91793.1| hypothetical protein SORBIDRAFT_01g026845 [Sorghum bicolor] Length = 295 Score = 53.9 bits (128), Expect(2) = 1e-06 Identities = 24/50 (48%), Positives = 33/50 (66%) Frame = -3 Query: 152 FNEEEIKKCVFSMNGNKAPGPDGIPALFFQHY*NIVGTDICNMVLSYLNN 3 F EE+KK +FS+ KAPGPDG+ A+FF+ + N V D+ VL +NN Sbjct: 223 FTREEVKKALFSIGDLKAPGPDGLHAIFFKRFWNFVEDDLVEEVLGAINN 272 Score = 23.1 bits (48), Expect(2) = 1e-06 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Frame = -1 Query: 331 ITSIEDEMGVCHQDLAKIHKVAVLFYTILFTSQ----DRGNLSGVSRL*THHFDE 179 + + D+ G+ H+D+ + + ++ LFT + + G L+ V R T+ ++ Sbjct: 163 VKGLVDDQGIFHEDIDTMGTMVKDYFGTLFTREVLDVEDGVLNDVDRRVTNEMNQ 217 >emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1369 Score = 56.6 bits (135), Expect = 2e-06 Identities = 24/50 (48%), Positives = 34/50 (68%) Frame = -3 Query: 152 FNEEEIKKCVFSMNGNKAPGPDGIPALFFQHY*NIVGTDICNMVLSYLNN 3 F EE+ + M+ NKAPGPDG+ ALF+QH+ + +G D+ VL+ LNN Sbjct: 437 FRREEVSAALAQMHPNKAPGPDGMNALFYQHFWDTIGEDVTTKVLNMLNN 486 >gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1229 Score = 50.8 bits (120), Expect(2) = 3e-06 Identities = 21/39 (53%), Positives = 29/39 (74%) Frame = -3 Query: 149 NEEEIKKCVFSMNGNKAPGPDGIPALFFQHY*NIVGTDI 33 N+EE+K VFS+N +KAPGPDG A F+ Y +I+ TD+ Sbjct: 324 NDEEVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTDV 362 Score = 25.0 bits (53), Expect(2) = 3e-06 Identities = 15/59 (25%), Positives = 28/59 (47%) Frame = -1 Query: 331 ITSIEDEMGVCHQDLAKIHKVAVLFYTILFTSQDRGNLSGVSRL*THHFDEISNNILDR 155 +T +ED GV + +I ++ ++ +FTS+ G+ S V + N+ L R Sbjct: 263 LTVMEDINGVAQHEEHQISQIISGYFQQIFTSESDGDFSVVDEAIEPMVSQGDNDFLTR 321