BLASTX nr result
ID: Lithospermum22_contig00035304
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00035304
(1208 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2... 71 2e-23
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 70 2e-17
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 66 3e-17
emb|CAN62051.1| hypothetical protein VITISV_016641 [Vitis vinifera] 68 4e-17
emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera] 68 4e-17
>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
predicted protein [Populus trichocarpa]
Length = 819
Score = 71.2 bits (173), Expect(3) = 2e-23
Identities = 35/121 (28%), Positives = 65/121 (53%)
Frame = +2
Query: 494 WMIGGDFNPVRSVSEAKGENLPNQQVMDDFNDSVKQLELMEHPYQGNNFTWCRNWKKNGK 673
W++ GDFN +R+ S+ G + MD + +++ ++ + Y G ++TW +N
Sbjct: 513 WILIGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCPENLI 572
Query: 674 LRRLDKILCNEKWLEVMYGCEVSIPEANISDHCLIDVLL*NDLKKELKPSRFFNFWTKHE 853
+R+LD++L NEKW E + +SDH + V + + + + KP RFF+ W H+
Sbjct: 573 MRKLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNKKKPFRFFDMWMDHD 632
Query: 854 D 856
+
Sbjct: 633 E 633
Score = 47.8 bits (112), Expect(3) = 2e-23
Identities = 25/109 (22%), Positives = 50/109 (45%)
Frame = +3
Query: 867 IIIEVWEERVEGNGFQVLQTXXXXXXXXXXXXXXXSYSNISCKVVEASRELETVQAKVYG 1046
++ +VW++ G L +SNIS +V +A +++ Q ++
Sbjct: 637 LVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNMAHFSNISDRVRDAKNKMDKAQQALHT 696
Query: 1047 GDLDPNLLLQMKMLEGNCMRLFEAEKFFYRDKSRVTWIDEGDANTPFFH 1193
+P L ++ + + AE+ F++ K+R+ W+ GD NT +FH
Sbjct: 697 AHENPILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYFH 745
Score = 37.4 bits (85), Expect(3) = 2e-23
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 256 NWECVHNTIPDVVGRIWICWKKACVKIRSVLVSQQHMLSEV*VCDSSMGNFWLSTVYGDN 435
+W ++N GRIW+CW VK+ +S Q + V + +++ +F S +YGDN
Sbjct: 431 SWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNI-SFNTSIIYGDN 489
Query: 436 DCKER 450
+ R
Sbjct: 490 NASLR 494
>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
predicted protein [Populus trichocarpa]
Length = 1386
Score = 69.7 bits (169), Expect(3) = 2e-17
Identities = 39/138 (28%), Positives = 68/138 (49%)
Frame = +2
Query: 494 WMIGGDFNPVRSVSEAKGENLPNQQVMDDFNDSVKQLELMEHPYQGNNFTWCRNWKKNGK 673
W++ GDFN +R+ S+ G + MD + +++ ++ + Y G ++TW +N
Sbjct: 941 WILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTVIREAKVDDLRYSGMHYTWSNQCPENLI 1000
Query: 674 LRRLDKILCNEKWLEVMYGCEVSIPEANISDHCLIDVLL*NDLKKELKPSRFFNFWTKHE 853
+R+LD++L NEKW E + +SDH + V + + + KP RFF+ W H+
Sbjct: 1001 MRKLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDMWMDHD 1060
Query: 854 DL*QNHYRSMGREGGGKW 907
+ RS G W
Sbjct: 1061 EFMPLGRRSNLLRGRNFW 1078
Score = 37.4 bits (85), Expect(3) = 2e-17
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 256 NWECVHNTIPDVVGRIWICWKKACVKIRSVLVSQQHMLSEV*VCDSSMGNFWLSTVYGDN 435
+W ++N GRIW+CW VK+ +S Q + V + +++ +F S +YGDN
Sbjct: 859 SWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNI-SFNTSIIYGDN 917
Query: 436 DCKER 450
+ R
Sbjct: 918 NASLR 922
Score = 28.9 bits (63), Expect(3) = 2e-17
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 96 FKKKIRFWNVRGINSPTKQHRFRKVFCKYDIVC--VIENKVKLK 221
F I WN+RG+N P K R++ + I ++E +VK K
Sbjct: 804 FPMIIGCWNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDK 847
Score = 69.3 bits (168), Expect(2) = 1e-14
Identities = 35/121 (28%), Positives = 64/121 (52%)
Frame = +2
Query: 494 WMIGGDFNPVRSVSEAKGENLPNQQVMDDFNDSVKQLELMEHPYQGNNFTWCRNWKKNGK 673
W++ GDFN +R+ S+ G + MD + +++ ++ + Y G ++TW +N
Sbjct: 660 WILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTVIREAKVDDLRYSGMHYTWSNQCPENLI 719
Query: 674 LRRLDKILCNEKWLEVMYGCEVSIPEANISDHCLIDVLL*NDLKKELKPSRFFNFWTKHE 853
+R+LD++L NEKW E + +SDH + V + + + KP RFF+ W H+
Sbjct: 720 MRKLDRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDMWMDHD 779
Query: 854 D 856
+
Sbjct: 780 E 780
Score = 37.4 bits (85), Expect(2) = 1e-14
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 256 NWECVHNTIPDVVGRIWICWKKACVKIRSVLVSQQHMLSEV*VCDSSMGNFWLSTVYGDN 435
+W ++N GRIW+CW VK+ +S Q + V + +++ +F S +YGDN
Sbjct: 578 SWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNI-SFNTSIIYGDN 636
Query: 436 DCKER 450
+ R
Sbjct: 637 NASLR 641
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 66.2 bits (160), Expect(2) = 3e-17
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Frame = +2
Query: 476 LVGDGA-WMIGGDFNPVRSVSE-AKGENLPNQQVMDDFNDSVKQLELMEHPYQGNNFTWC 649
L G+G W++ GDFN V +E ++ +L + M F D + + EL + ++GN FTW
Sbjct: 81 LSGNGKPWIMLGDFNQVLCPAEHSQATSLNVNRRMKVFRDCLFEAELCDLVFKGNTFTWW 140
Query: 650 RNWKKNGKLRRLDKILCNEKWLEVMYGCEVSIPEANISDHCLIDVLL*NDLKKELKPSRF 829
++LD+IL NE W E + SDH V++ + +E +P RF
Sbjct: 141 NKSATRPVAKKLDRILVNESWCSRFPSAYAVFGEPDFSDHASCGVIINPLMHREKRPFRF 200
Query: 830 FNFWTKHED 856
+NF ++ D
Sbjct: 201 YNFLLQNPD 209
Score = 49.7 bits (117), Expect(2) = 3e-17
Identities = 27/74 (36%), Positives = 43/74 (58%)
Frame = +3
Query: 972 SYSNISCKVVEASRELETVQAKVYGGDLDPNLLLQMKMLEGNCMRLFEAEKFFYRDKSRV 1151
++SN+ +V EA + Q K PN L+M+ + + L +AE+ F+ +SRV
Sbjct: 249 NFSNLEKRVKEAHNLVLYRQNKTLSDPTIPNAALEMEA-QRKWLILVKAEESFFCQRSRV 307
Query: 1152 TWIDEGDANTPFFH 1193
TW+ EGD+NT +FH
Sbjct: 308 TWMGEGDSNTSYFH 321
>emb|CAN62051.1| hypothetical protein VITISV_016641 [Vitis vinifera]
Length = 1866
Score = 67.8 bits (164), Expect(3) = 4e-17
Identities = 44/138 (31%), Positives = 66/138 (47%)
Frame = +2
Query: 494 WMIGGDFNPVRSVSEAKGENLPNQQVMDDFNDSVKQLELMEHPYQGNNFTWCRNWKKNGK 673
W +GGDFN +R SE G + M DF++ ++ EL++ P + ++TW N ++N
Sbjct: 869 WCVGGDFNVIRRSSEKLGGSRLT-PCMKDFDEFIRDCELIDSPLRSVSYTW-SNMQENPV 926
Query: 674 LRRLDKILCNEKWLEVMYGCEVSIPEANISDHCLIDVLL*NDLKKELKPSRFFNFWTKHE 853
+RLD+ L + +W +V + SDH I VL N K P RF N W +H
Sbjct: 927 CKRLDRFLYSNEWEQVFPQSLQGVLPRWTSDHWPI-VLETNPFKWGPTPFRFENMWLQHS 985
Query: 854 DL*QNHYRSMGREGGGKW 907
+N R G W
Sbjct: 986 SFKENFGRWWSEFQGNGW 1003
Score = 45.8 bits (107), Expect(3) = 4e-17
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +3
Query: 972 SYSNISCKVVEASRELETVQAKVYGGDLDPNLLLQMKMLEGNCMRLFEAEKFFYRDKSRV 1151
S+ +S K + L + G L LL+Q +G L E+ +R K+RV
Sbjct: 1026 SFGELSKKKKDILAVLANFDSLEQEGGLSQELLVQRAFSKGELEELILREEIHWRQKARV 1085
Query: 1152 TWIDEGDANTPFFH 1193
W+ EGD N+ FFH
Sbjct: 1086 KWVKEGDCNSKFFH 1099
Score = 21.2 bits (43), Expect(3) = 4e-17
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 403 NFWLSTVYGDND 438
+ WLS VYG N+
Sbjct: 836 SLWLSAVYGPNN 847
>emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]
Length = 1844
Score = 67.8 bits (164), Expect(3) = 4e-17
Identities = 44/138 (31%), Positives = 66/138 (47%)
Frame = +2
Query: 494 WMIGGDFNPVRSVSEAKGENLPNQQVMDDFNDSVKQLELMEHPYQGNNFTWCRNWKKNGK 673
W +GGDFN +R SE G + M DF++ ++ EL++ P + ++TW N ++N
Sbjct: 891 WCVGGDFNVIRRSSEKLGGSRLT-PCMKDFDEFIRDCELIDSPLRSVSYTW-SNMQENPV 948
Query: 674 LRRLDKILCNEKWLEVMYGCEVSIPEANISDHCLIDVLL*NDLKKELKPSRFFNFWTKHE 853
+RLD+ L + +W +V + SDH I VL N K P RF N W +H
Sbjct: 949 CKRLDRFLYSNEWEQVFPQSLQGVLPRWTSDHWPI-VLETNPFKWGPTPFRFENMWLQHS 1007
Query: 854 DL*QNHYRSMGREGGGKW 907
+N R G W
Sbjct: 1008 SFKENFGRWWSEFQGNGW 1025
Score = 45.8 bits (107), Expect(3) = 4e-17
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +3
Query: 972 SYSNISCKVVEASRELETVQAKVYGGDLDPNLLLQMKMLEGNCMRLFEAEKFFYRDKSRV 1151
S+ +S K + L + G L LL+Q +G L E+ +R K+RV
Sbjct: 1048 SFGELSKKKKDILAVLANFDSLEQEGGLSQELLVQRAFSKGELEELILREEIHWRQKARV 1107
Query: 1152 TWIDEGDANTPFFH 1193
W+ EGD N+ FFH
Sbjct: 1108 KWVKEGDCNSKFFH 1121
Score = 21.2 bits (43), Expect(3) = 4e-17
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 403 NFWLSTVYGDND 438
+ WLS VYG N+
Sbjct: 858 SLWLSAVYGPNN 869