BLASTX nr result

ID: Lithospermum22_contig00035297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035297
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334343.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06
ref|XP_002318911.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06
ref|XP_002512599.1| conserved hypothetical protein [Ricinus comm...    57   3e-06

>ref|XP_002334343.1| predicted protein [Populus trichocarpa]
           gi|224124272|ref|XP_002329982.1| predicted protein
           [Populus trichocarpa] gi|118481367|gb|ABK92626.1|
           unknown [Populus trichocarpa]
           gi|222871401|gb|EEF08532.1| predicted protein [Populus
           trichocarpa] gi|222871407|gb|EEF08538.1| predicted
           protein [Populus trichocarpa]
          Length = 130

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 41/111 (36%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
 Frame = -3

Query: 459 MGFQQFMEGRWNGRYERLGSNDER-------AGRSKRRWVKKXXXXXXXXXXXXXXXXNW 301
           MGFQ         RYE+L +  ++         R  R WVKK                 +
Sbjct: 1   MGFQANAVIPSRFRYEKLINGGDQYHEKLMARPRRWRFWVKKMNGGVKGLRLSRSRKLTF 60

Query: 300 KAFSFVLLPK---RIARFYADIMKRVNMED---VYPAITFSYHWGLPVLSH 166
           KA S +L+P    RIA+ YA ++ R+ M D   +YP I FS HWGLPVLSH
Sbjct: 61  KALSVILMPSPNSRIAKVYAHVIDRIKMMDDLTLYPNIIFSTHWGLPVLSH 111


>ref|XP_002318911.1| predicted protein [Populus trichocarpa] gi|222857287|gb|EEE94834.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
 Frame = -3

Query: 468 LLQMGFQQFMEGRWNGRYERLGSNDER-----AGRSKRR--WVKKXXXXXXXXXXXXXXX 310
           +LQ+GF+  +      RYE+L + +++       R +RR  WVKK               
Sbjct: 1   MLQVGFEAVVGMHSRFRYEKLSNGEDQNHEKLMARPRRRHCWVKKMNGRVKGLRLSRSRK 60

Query: 309 XNWKAFSFVLLPK---RIARFYADIMKRVNMED---VYPAITFSYHWGLPVLSH 166
             +KA S +L+P    RIA+ YA I+ R+ + D   +YP I  S  WGLP LSH
Sbjct: 61  LTFKALSVILMPSPSSRIAKVYAHIIDRIKIMDDLNLYPNIILSTRWGLPGLSH 114


>ref|XP_002512599.1| conserved hypothetical protein [Ricinus communis]
           gi|223548560|gb|EEF50051.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 82

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
 Frame = -3

Query: 303 WKAFSFVLLPKRIARFYADIMKRVN-MEDVYPAITFSYHWGLPVLSHSNNLRCRNSGIVF 127
           +KA S ++LP RIAR YAD + R+  M+D+YP I FS   GLPVLSH  +++C+   I  
Sbjct: 18  FKALSVMVLPSRIARVYADTISRIKMMDDLYPNIIFSTQLGLPVLSHP-SIKCKRRAISL 76

Query: 126 DR 121
            R
Sbjct: 77  HR 78


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