BLASTX nr result

ID: Lithospermum22_contig00035295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035295
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_003588474.1| Pentatricopeptide repeat-containing protein ...    55   8e-06

>ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
 Frame = -3

Query: 168 VVEDKDLLKKTPNGK--LQVLELIDEGRLYPNGSLYNKLIKMCTQLKRLPEGKMVH 7
           V++D++LL+ + N K  L VL+LID G L P+ +LYN L+K CTQL +L EGK+VH
Sbjct: 42  VIDDRNLLRPSLNSKTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVH 97


>ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477522|gb|AES58725.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 668

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/59 (44%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
 Frame = -3

Query: 168 VVEDKDLLKKTPNGK----LQVLELIDEGRLYPNGSLYNKLIKMCTQLKRLPEGKMVHT 4
           +++D +LL+ + N      L VL+LI+ G L P+ ++YNKL+K CT L +L +GK+VHT
Sbjct: 57  IIDDTNLLRPSLNPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHT 115


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