BLASTX nr result

ID: Lithospermum22_contig00035280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035280
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533014.1| PREDICTED: ABC transporter C family member 8...    60   2e-07
ref|XP_002527423.1| multidrug resistance-associated protein 1, 3...    60   2e-07
ref|XP_003638650.1| Multidrug resistance protein ABC transporter...    59   5e-07
ref|XP_003627965.1| ABC transporter C family member [Medicago tr...    59   5e-07
ref|XP_003529736.1| PREDICTED: ABC transporter C family member 8...    55   4e-06

>ref|XP_003533014.1| PREDICTED: ABC transporter C family member 8-like [Glycine max]
          Length = 1469

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = -1

Query: 240 FDMSSTCTQRTVLYIFNIIFIVAFYTTLISHFVRNN-TTKWYRTDWITVTLSVFCGSLSI 64
           F ++S  TQR ++ I NI F+  FY +L+S+ ++ +  +  YR  WI V  SV C  LSI
Sbjct: 23  FSLTSFSTQRCIIDIINIFFMGVFYASLLSNLIKKSPASSSYRKGWIHVVASVCCTLLSI 82

Query: 63  VYFGAALWNLL 31
            YF   LWNL+
Sbjct: 83  AYFIDGLWNLI 93


>ref|XP_002527423.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
           gi|223533233|gb|EEF34989.1| multidrug
           resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
          Length = 1475

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
 Frame = -1

Query: 237 DMSSTCTQRTVLYIFNIIFIVAFYTTLISHFVRNNTTKWY-RTDWITVTLSVFCGSLSIV 61
           D+ S CTQR ++ I N++F+  FY  L+   +R +      R DWI+V +S+ C  +SI 
Sbjct: 27  DLGSPCTQRIIIDIINLVFLGVFYLFLLLGSIRKHQVSGSNRRDWISVVVSICCTLISIA 86

Query: 60  YFGAALWNLL 31
           Y G  LW+L+
Sbjct: 87  YLGVGLWDLI 96


>ref|XP_003638650.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula] gi|355504585|gb|AES85788.1| Multidrug
           resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 1549

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
 Frame = -1

Query: 240 FDMSSTCTQRTVLYIFNIIFIVAFYTTLISHFVRNNTTKW-YRTDWITVTLSVFCGSLSI 64
           FD +S C+QR+++   NI+F+  + T+LI   +R ++T   +   WI + +S+ CG++SI
Sbjct: 19  FDFNSLCSQRSLIDTINILFVCVYCTSLIITLIRKSSTNGSHGKCWIFIIVSICCGTISI 78

Query: 63  VYFGAALWNLL-DDDNGE 13
            +F   LW+ +   DN E
Sbjct: 79  AFFSIGLWDFIAKTDNSE 96


>ref|XP_003627965.1| ABC transporter C family member [Medicago truncatula]
           gi|355521987|gb|AET02441.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1463

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
 Frame = -1

Query: 240 FDMSSTCTQRTVLYIFNIIFIVAFYTTLISHFVRNN-TTKWYRTDWITVTLSVFCGSLSI 64
           FD++S C+QR+++   NI+F+  +YT+L+   +R + T +  R  W  + +S+ C  +SI
Sbjct: 19  FDLNSLCSQRSLVDTINILFLCVYYTSLLITLIRKSCTNESQRKCWNFLIVSICCALISI 78

Query: 63  VYFGAALWNLL-DDDNGE 13
            +F   LWNL+   DN E
Sbjct: 79  AFFSFGLWNLIAKTDNSE 96


>ref|XP_003529736.1| PREDICTED: ABC transporter C family member 8-like [Glycine max]
          Length = 1951

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
 Frame = -1

Query: 240 FDMSSTCTQRTVLYIFNIIFIVAFYTTLISHFVRN-NTTKWYRTDWITVTLSVFCGSLSI 64
           F+ +S C+QRT +   N++F+  FYT++I   +R  + +  +RT W  +  S+ C  +SI
Sbjct: 503 FEFTSFCSQRTTIDTINLLFVCFFYTSMIISIIRRCSISCSFRTKWTFLVASICCAIISI 562

Query: 63  VYFGAALWNLL--DDDNGEVRW 4
            ++   LW L+   D+  ++ W
Sbjct: 563 AFYSIGLWILIVKTDNTKQLSW 584


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