BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035252
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   160   3e-37
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              149   7e-34
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   143   4e-32
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   142   7e-32
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   137   3e-30

>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  160 bits (405), Expect = 3e-37
 Identities = 76/155 (49%), Positives = 104/155 (67%), Gaps = 1/155 (0%)
 Frame = +1

Query: 298 MDHELSSAHQIPSAVLRSIKLGILTPDEARNIKVKTIIAGNEVTDPALGLPNPTAECLTC 477
           MD++     Q+PS +L  IK  + T ++   I V  I A NE+TDP LG+PNP+ +C TC
Sbjct: 1   MDNDFLEEQQVPSGLLIGIKFDVSTEEDMEKISVMKIDAVNEITDPKLGVPNPSCQCSTC 60

Query: 478 GAKNWKTCEGHFGIIELPYTVLNPLFIGEIVQALNKICPGCKRLLRHK-VKSADTSSLLH 654
           GAK+ K CEGHFG+I+ P+T+L+P F+ E+VQ LNKICPGCK   + + VK AD+ S   
Sbjct: 61  GAKDTKKCEGHFGVIKFPFTILHPYFLTEVVQILNKICPGCKSTRQGQWVKGADSGSRRL 120

Query: 655 QNRNCKYCSGYSRDRYPKMKFYLSLKDPSAKMAVI 759
           +++ CKYC+  S D YP MKF +S KD   K A+I
Sbjct: 121 RSKGCKYCAANSNDWYPTMKFKVSSKDLFRKTAII 155


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  149 bits (376), Expect = 7e-34
 Identities = 73/157 (46%), Positives = 100/157 (63%), Gaps = 3/157 (1%)
 Frame = +1

Query: 298 MDHELSSAHQIPSAVLRSIKLGILTPDEARNIKVKTIIAGNEVTDPALGLPNPTAECLTC 477
           MD++     Q+PS +L  IK  + T ++   I V  I A NE+TDP LG+PNP+ +C TC
Sbjct: 1   MDNDFLEEQQVPSGLLIGIKFDVSTEEDMEKISVMKIDAVNEITDPKLGVPNPSCQCSTC 60

Query: 478 GAKNWKTCEGHFGIIELPYTVLNPLFIGEIVQALNKICPGCKRLLRH---KVKSADTSSL 648
           GAK+ K CEGHFG+I+ P+T+L+P F+ E+VQ LNKICPGCK   +    KV+       
Sbjct: 61  GAKDTKKCEGHFGVIKFPFTILHPYFLTEVVQILNKICPGCKSTRQGQWVKVRRL----- 115

Query: 649 LHQNRNCKYCSGYSRDRYPKMKFYLSLKDPSAKMAVI 759
             +++ CKYC+  S D YP MKF +S KD   K A+I
Sbjct: 116 --RSKGCKYCAANSNDWYPTMKFKVSSKDLFRKTAII 150


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  143 bits (361), Expect = 4e-32
 Identities = 76/188 (40%), Positives = 104/188 (55%), Gaps = 34/188 (18%)
 Frame = +1

Query: 298 MDHELSSAHQIPSAVLRSIKLGILTPDEARNIKVKTIIAGNEVTDPALGLPNPTAECLTC 477
           MD++     Q+PS +L  IK  + T ++   I V  I A NE+TDP LG+PNP+ +C TC
Sbjct: 1   MDNDFLEEQQVPSGLLIGIKFDVSTEEDMEKISVMKIDAVNEITDPKLGVPNPSCQCSTC 60

Query: 478 GAKNWKTCEG---------------------------------HFGIIELPYTVLNPLFI 558
           GAK+ K CEG                                 HFG+I+ P+T+L+P F+
Sbjct: 61  GAKDTKKCEGAVRQVIQKLYLLMISCYLYFLEYAKLXLFIFLGHFGVIKFPFTILHPYFL 120

Query: 559 GEIVQALNKICPGCKRLLRHK-VKSADTSSLLHQNRNCKYCSGYSRDRYPKMKFYLSLKD 735
            E+VQ LNKICPGCK   + + VK AD+ S   +++ CKYC+  S D YP MKF +S KD
Sbjct: 121 TEVVQILNKICPGCKSTRQGQWVKGADSGSRRLRSKGCKYCAANSNDWYPTMKFKVSSKD 180

Query: 736 PSAKMAVI 759
              K A+I
Sbjct: 181 LFRKTAII 188


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
           sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
           QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
           1-like [Cucumis sativus]
          Length = 1469

 Score =  142 bits (359), Expect = 7e-32
 Identities = 67/155 (43%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
 Frame = +1

Query: 298 MDHELSSAHQIPSAVLRSIKLGILTPDEARNIKVKTIIAGNEVTDPALGLPNPTAECLTC 477
           M+ E      IPS +L  I   +    +  NI V T+ A NEV+DP LGLPNP+ +C TC
Sbjct: 1   MEDEQDGELPIPSGLLTGINFSVSNQQDIENIAVITVDAANEVSDPKLGLPNPSYQCTTC 60

Query: 478 GAKNWKTCEGHFGIIELPYTVLNPLFIGEIVQALNKICPGCKRLLRHK-VKSADTSSLLH 654
           GA + K CEGHFG+I+ PYT+++P F+ E+ Q LNK+CPGCK + +    K  D +S  +
Sbjct: 61  GASSLKFCEGHFGVIKFPYTIIHPYFLSEVAQVLNKVCPGCKSVRQELWGKVEDPTSDYN 120

Query: 655 QNRNCKYCSGYSRDRYPKMKFYLSLKDPSAKMAVI 759
           + + C+YC G  +D YP M+F LS  D   K  ++
Sbjct: 121 RPKGCRYCFGSLKDWYPPMRFKLSTTDMFKKSMIM 155


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
           gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
           [Populus trichocarpa]
          Length = 1517

 Score =  137 bits (345), Expect = 3e-30
 Identities = 72/183 (39%), Positives = 100/183 (54%), Gaps = 29/183 (15%)
 Frame = +1

Query: 298 MDHELSSAHQIPSAVLRSIKLGILTPDEARNIKVKTIIAGNEVTDPALGLPNPTAECLTC 477
           M+ + S   Q+PSA++  +  G+LT  E   + V  I A +EVTDP LGLPNP+++C TC
Sbjct: 1   MEIDFSEEQQVPSALITGMAFGVLTEAETEKLSVLNIDAVSEVTDPKLGLPNPSSQCSTC 60

Query: 478 GAKNWKTCEG-----------------------------HFGIIELPYTVLNPLFIGEIV 570
           G+++ K+CEG                             HFG+I  PYT+++P F+ E+V
Sbjct: 61  GSRDLKSCEGIVDVDLNSADRLASIATGDCANILLSLSGHFGVINFPYTIVHPYFLSEVV 120

Query: 571 QALNKICPGCKRLLRHKVKSADTSSLLHQNRNCKYCSGYSRDRYPKMKFYLSLKDPSAKM 750
           Q LNKICPGCK +   K     T     Q + CKYC+G S   YP MKF +S K+   K 
Sbjct: 121 QILNKICPGCKSIRLAKATELITKE-NPQRKGCKYCAGNSLGWYPPMKFKVSSKEIFRKT 179

Query: 751 AVI 759
           A+I
Sbjct: 180 AII 182