BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035227
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...   210   1e-52
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
ref|XP_002519113.1| pentatricopeptide repeat-containing protein,...   192   2e-47
ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|NP_179197.1| pentatricopeptide repeat-containing protein [Ar...   164   7e-39

>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score =  210 bits (534), Expect = 1e-52
 Identities = 94/172 (54%), Positives = 131/172 (76%)
 Frame = +2

Query: 2   FNAIMVGFYREALVEKVEEVWAEMERVECEPDAYSYSIVMAAYCDDGRMEDAIKVWEGME 181
           FNA+MV FYR+  VEKVEE+WAEM   +C P+AYSYS++MAA+CD+GRM +  K+WE M 
Sbjct: 248 FNALMVCFYRDGGVEKVEEIWAEMGEWDCNPNAYSYSVLMAAFCDEGRMGEVEKLWEEMR 307

Query: 182 SKGVRQDVVTYNTLIGGFCSVGEMERAEELFQNMVMSGLGSTCVSFEHLMKGYCKVGNVD 361
            K +  D++ YNT+IGGFC +GE+ER EELF+ M +SG+ STCV++EHL+ GYC++G+VD
Sbjct: 308 MKKMEHDIMAYNTIIGGFCRIGEIERGEELFREMELSGIQSTCVTYEHLINGYCEIGDVD 367

Query: 362 SALLLYKDMSNKGLKPESSSVDEFITLLCDKNEMLKALQYMRVARKKHDYNP 517
           SA+LLYKDM  KG + E+ +VD  I LLC+   + +AL+ +RVA    ++ P
Sbjct: 368 SAVLLYKDMCRKGFRAEARTVDGMILLLCNNRRVHEALKLLRVAMGNVEFAP 419


>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Glycine max]
          Length = 487

 Score =  192 bits (488), Expect = 2e-47
 Identities = 84/172 (48%), Positives = 133/172 (77%)
 Frame = +2

Query: 2   FNAIMVGFYREALVEKVEEVWAEMERVECEPDAYSYSIVMAAYCDDGRMEDAIKVWEGME 181
           +N +M+  Y++ LVE+VE++W EM +   +P+AYSYS++MA +CD+GRM DA K+WE + 
Sbjct: 247 YNDLMLCCYQDGLVERVEKIWIEM-KCNYKPNAYSYSVLMATFCDEGRMGDAEKLWEELR 305

Query: 182 SKGVRQDVVTYNTLIGGFCSVGEMERAEELFQNMVMSGLGSTCVSFEHLMKGYCKVGNVD 361
           S+ +  DVV+YNT+IGGFC++G++ RAEE F+ M ++G+G+T  ++EHL+KGYC +G+VD
Sbjct: 306 SEKIEPDVVSYNTIIGGFCTIGDVGRAEEFFREMAVAGVGTTASTYEHLVKGYCNIGDVD 365

Query: 362 SALLLYKDMSNKGLKPESSSVDEFITLLCDKNEMLKALQYMRVARKKHDYNP 517
           SA+L+YKDM+   L+P++S++D  I LLCDK  + ++L+++R A  K D  P
Sbjct: 366 SAVLVYKDMARSDLRPDASTLDVMIRLLCDKGRVRESLEFVRCAVGKFDLIP 417


>ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541776|gb|EEF43324.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score =  192 bits (488), Expect = 2e-47
 Identities = 85/170 (50%), Positives = 125/170 (73%)
 Frame = +2

Query: 2   FNAIMVGFYREALVEKVEEVWAEMERVECEPDAYSYSIVMAAYCDDGRMEDAIKVWEGME 181
           FN +M+GFYR+  +E VEEVW+EMER EC P+ +SYS++M  + D GR ++  K+WE M 
Sbjct: 242 FNELMMGFYRDGELEMVEEVWSEMERFECVPNGFSYSVLMTVFLDVGRTKEIEKLWEEMR 301

Query: 182 SKGVRQDVVTYNTLIGGFCSVGEMERAEELFQNMVMSGLGSTCVSFEHLMKGYCKVGNVD 361
           +KG++ DVV YNT+IGGFC +GE+E+AEEL + M ++G+ + CV+FEHL+ GYC VG+VD
Sbjct: 302 AKGIKGDVVAYNTVIGGFCKIGEIEKAEELSREMELNGVEANCVTFEHLINGYCSVGDVD 361

Query: 362 SALLLYKDMSNKGLKPESSSVDEFITLLCDKNEMLKALQYMRVARKKHDY 511
           SA+L++K M  KG + E S +D  I  LC+K  + +AL+ MR+A +   +
Sbjct: 362 SAILVFKHMVRKGFRAEGSVMDVLIGGLCEKRRVSEALEIMRIAMRNDGF 411


>ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|222849039|gb|EEE86586.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  186 bits (471), Expect = 2e-45
 Identities = 80/172 (46%), Positives = 126/172 (73%)
 Frame = +2

Query: 2   FNAIMVGFYREALVEKVEEVWAEMERVECEPDAYSYSIVMAAYCDDGRMEDAIKVWEGME 181
           FN +MVGFYR   VE VEE+W+EMER  C  + +SY +++A +C+ GR+ +A ++W+ M 
Sbjct: 250 FNELMVGFYRNGEVEMVEEIWSEMERFGCVANGFSYGVLIAVFCEGGRLSEAERLWDEMR 309

Query: 182 SKGVRQDVVTYNTLIGGFCSVGEMERAEELFQNMVMSGLGSTCVSFEHLMKGYCKVGNVD 361
            KG+  DVV YNT+IGGFC  GE+E+AE LF+ M +SG+ S+CV+FEHL++GYC++G+V+
Sbjct: 310 VKGIMPDVVAYNTIIGGFCKAGEVEKAEGLFREMGLSGIESSCVTFEHLIEGYCRIGDVN 369

Query: 362 SALLLYKDMSNKGLKPESSSVDEFITLLCDKNEMLKALQYMRVARKKHDYNP 517
           SA+L+YKDM  +  + E+ +++  I  LC++  + +AL+ MR A +   ++P
Sbjct: 370 SAILVYKDMRRRDFRLEALTMEVLIGGLCEQKRVFEALKIMRSAMRDVSFHP 421



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
 Frame = +2

Query: 2   FNAIMVGFYREALVEKVEEVWAEMERVECEPDAYSYSIVMAAYCDDGRMEDAIKVWEG-M 178
           F  ++ G+ R   V     V+ +M R +   +A +  +++   C+  R+ +A+K+    M
Sbjct: 355 FEHLIEGYCRIGDVNSAILVYKDMRRRDFRLEALTMEVLIGGLCEQKRVFEALKIMRSAM 414

Query: 179 ESKGVRQDVVTYNTLIGGFCSVGEMERAEELFQNMVMSGLGSTCVSFEHLMKGYCKVGNV 358
                  +  +Y  LI G C  G+ME A +L   MV  G       +   ++GY K+GN 
Sbjct: 415 RDVSFHPNGKSYELLINGLCEDGKMEEALKLQSEMVGKGFDPNSAIYGAFIEGYVKLGNE 474

Query: 359 DSALLLYKDMS 391
           + A +L K+MS
Sbjct: 475 EMAAMLRKEMS 485


>ref|NP_179197.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75267579|sp|Q9XIM8.1|PP155_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g15980 gi|5306237|gb|AAD41970.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251359|gb|AEC06453.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 498

 Score =  164 bits (415), Expect = 7e-39
 Identities = 73/154 (47%), Positives = 108/154 (70%), Gaps = 1/154 (0%)
 Frame = +2

Query: 2   FNAIMVGFYREALVEKVEEVWAEMER-VECEPDAYSYSIVMAAYCDDGRMEDAIKVWEGM 178
           FN++MV FYRE   E VE +W EME  V C P+ YSY+++M AYC  G M +A KVWE M
Sbjct: 248 FNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEM 307

Query: 179 ESKGVRQDVVTYNTLIGGFCSVGEMERAEELFQNMVMSGLGSTCVSFEHLMKGYCKVGNV 358
           + +GV  D+V YNT+IGG CS  E+ +A+ELF++M + G+  TC+++EHL+ GYCK G+V
Sbjct: 308 KVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDV 367

Query: 359 DSALLLYKDMSNKGLKPESSSVDEFITLLCDKNE 460
           DS L++Y++M  KG + +  +++  +  LCD  +
Sbjct: 368 DSGLVVYREMKRKGFEADGLTIEALVEGLCDDRD 401



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/139 (24%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
 Frame = +2

Query: 89  EPDAYSYSIVMAAYCDDGRMEDAIKVWEGMESK-GVRQDVVTYNTLIGGFCSVGEMERAE 265
           +P+A +++ +M ++  +G  E   ++W  ME + G   +V +YN L+  +C+ G M  AE
Sbjct: 242 KPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAE 301

Query: 266 ELFQNMVMSGLGSTCVSFEHLMKGYCKVGNVDSALLLYKDMSNKGLKPESSSVDEFITLL 445
           ++++ M + G+    V++  ++ G C    V  A  L++DM  KG++    + +  +   
Sbjct: 302 KVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGY 361

Query: 446 CDKNEMLKALQYMRVARKK 502
           C   ++   L   R  ++K
Sbjct: 362 CKAGDVDSGLVVYREMKRK 380



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
 Frame = +2

Query: 2   FNAIMVGFYREALVEKVEEVWAEMERVECEPDAYSYSIVMAAYCDDGRMEDAIKVWEGME 181
           +N ++ G      V K +E++ +M     E    +Y  ++  YC  G ++  + V+  M+
Sbjct: 319 YNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMK 378

Query: 182 SKGVRQDVVTYNTLIGGFCSVGEMER---AEELFQNMVMSGL---GSTCVSFEHLMKGYC 343
            KG   D +T   L+ G C   + +R   A ++ ++ V   +      C  +E L+K  C
Sbjct: 379 RKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNC--YELLVKRLC 436

Query: 344 KVGNVDSALLLYKDMSNKGLKPESSSVDEFI 436
           + G +D AL +  +M  KG KP   +   FI
Sbjct: 437 EDGKMDRALNIQAEMVGKGFKPSQETYRAFI 467