BLASTX nr result

ID: Lithospermum22_contig00035224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035224
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    59   4e-07
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    55   8e-06

>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 6/119 (5%)
 Frame = +3

Query: 3   GRLHLIENKHNQAMIFNVMEMRNDYSEWYVKSKVDINFVTKIYPRVM----GEYGYLNIL 170
           G LHL+E   +    FNV EM  D+S W+VK +VD+N V   +P ++     EY Y+   
Sbjct: 255 GHLHLVEIYESSTTQFNVYEMERDHSGWFVKFRVDLNGVALAFPGIIEGYHEEYDYMYSF 314

Query: 171 SLMWV--KDEQQKMKLMLSVPGKIISCDVDEETVTELFDVQPERSYYKSYHVYDHFESL 341
           S++ +  +++++   L L +PGK+I  +   ++  +  D     ++  SY  + + ESL
Sbjct: 315 SVLCIVRREKEEDSFLALHIPGKVIGYNFSSKSY-QTSDTDCPLAFGWSY-AFQYIESL 371


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
 Frame = +3

Query: 3   GRLHLIENKHNQAMIFNVMEMRNDYSEWYVKSKVDINFVTKIYPRVM------GEYGYLN 164
           G LHLIE    +   FNV EM  DYS W ++ +V ++ V   +P ++      G+  Y  
Sbjct: 263 GHLHLIEIYGLRTTQFNVYEMEKDYSFWRIRYRVQLDHVVAAFPEMVRSYLDAGDSNYYA 322

Query: 165 ILSLMWV-KDEQQKMKLMLSVPGKIISCDVDEETVTELFDV 284
            + L  V +D  ++  L+L +PGK+IS ++  +T  ++ ++
Sbjct: 323 FVVLSLVEEDATEESSLLLHIPGKVISYNLKNKTFKKVCEL 363


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