BLASTX nr result

ID: Lithospermum22_contig00035200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035200
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...   140   1e-31
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]   139   2e-31
emb|CBI36629.3| unnamed protein product [Vitis vinifera]              139   3e-31
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...   138   5e-31
ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...   137   9e-31

>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/107 (66%), Positives = 78/107 (72%), Gaps = 12/107 (11%)
 Frame = -2

Query: 384 PFDCAVCLCEFEGEDELRLLPKCSHAFHMECIDTWLLSHSTCPLCRDSLLTDCPPSSNCS 205
           PFDCAVCLCEFE ED+LRLLPKCSHAFHMECIDTWLLSHSTCPLCR SLL D  P+  CS
Sbjct: 171 PFDCAVCLCEFEAEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRGSLLPDFSPNDICS 230

Query: 204 PLVFVLESRSTETSRETVLERDS------------NHSGNTNNEVGS 100
           P+V VLES S E+SRE V +R S            +H G  +NE GS
Sbjct: 231 PIVLVLESGS-ESSREIVSDRHSALGTNNSVLRTNSHLGCNDNEFGS 276


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score =  139 bits (351), Expect = 2e-31
 Identities = 71/107 (66%), Positives = 78/107 (72%), Gaps = 12/107 (11%)
 Frame = -2

Query: 384 PFDCAVCLCEFEGEDELRLLPKCSHAFHMECIDTWLLSHSTCPLCRDSLLTDCPPSSNCS 205
           PFDCAVCLCEFE ED+LRLLPKCSHAFHMECIDTWLLSHSTCPLCR SLL D  P+  CS
Sbjct: 171 PFDCAVCLCEFEAEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPDFSPNDICS 230

Query: 204 PLVFVLESRSTETSRETVLERDS------------NHSGNTNNEVGS 100
           P+V VLES S E+SRE V +R S            +H G  +NE GS
Sbjct: 231 PIVLVLESGS-ESSREIVSDRHSALGTNNSVLRTNSHLGCNDNEFGS 276


>emb|CBI36629.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/92 (72%), Positives = 73/92 (79%)
 Frame = -2

Query: 384 PFDCAVCLCEFEGEDELRLLPKCSHAFHMECIDTWLLSHSTCPLCRDSLLTDCPPSSNCS 205
           PFDCAVCLCEFE ED+LRLLPKCSHAFHMECIDTWLLSHSTCPLCR SLL D  P+  CS
Sbjct: 171 PFDCAVCLCEFEAEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRGSLLPDFSPNDICS 230

Query: 204 PLVFVLESRSTETSRETVLERDSNHSGNTNNE 109
           P+V VLES S E+SRE V +R S    N + E
Sbjct: 231 PIVLVLESGS-ESSREIVSDRHSALGTNNSEE 261


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score =  138 bits (347), Expect = 5e-31
 Identities = 71/118 (60%), Positives = 87/118 (73%), Gaps = 12/118 (10%)
 Frame = -2

Query: 384 PFDCAVCLCEFEGEDELRLLPKCSHAFHMECIDTWLLSHSTCPLCRDSLLTDCPPSSNCS 205
           PFDCAVCLCEFE ED+LRLLPKCSHAFHMECIDTWLLSHSTCPLCR SLL +   +S+CS
Sbjct: 131 PFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRGSLLPEFSSNSSCS 190

Query: 204 PLVFVLESRSTETSRETVLERD-----------SNHSG-NTNNEVGSSIVNSQLSNDE 67
           P+V VLES S E+SRE + +RD           +++ G + +NE+GSS +   L + E
Sbjct: 191 PVVLVLESGS-ESSREIITDRDNIGRTSSVLTTNSYLGFHGDNELGSSRIEISLKSGE 247


>ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL13-like,
           partial [Glycine max]
          Length = 524

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/82 (76%), Positives = 71/82 (86%)
 Frame = -2

Query: 384 PFDCAVCLCEFEGEDELRLLPKCSHAFHMECIDTWLLSHSTCPLCRDSLLTDCPPSSNCS 205
           PFDCAVCLCEFE ED+LRLLPKCSHAFHMECIDTWLLSHSTCPLCR +LL +   S+ CS
Sbjct: 131 PFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRATLLPEFSASNACS 190

Query: 204 PLVFVLESRSTETSRETVLERD 139
           P+V VLES S+E+SRE V ER+
Sbjct: 191 PIVLVLESGSSESSREIVPERE 212


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