BLASTX nr result

ID: Lithospermum22_contig00035132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035132
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534418.1| Structural maintenance of chromosome, putati...   185   3e-45
ref|XP_002323859.1| condensin complex components subunit [Populu...   181   5e-44
ref|XP_003554891.1| PREDICTED: structural maintenance of chromos...   176   2e-42
ref|XP_003543852.1| PREDICTED: structural maintenance of chromos...   176   2e-42
ref|NP_199671.1| structural maintenance of chromosomes protein 4...   171   7e-41

>ref|XP_002534418.1| Structural maintenance of chromosome, putative [Ricinus communis]
            gi|223525329|gb|EEF27966.1| Structural maintenance of
            chromosome, putative [Ricinus communis]
          Length = 1259

 Score =  185 bits (470), Expect = 3e-45
 Identities = 98/153 (64%), Positives = 118/153 (77%)
 Frame = +2

Query: 2    DQATRIAYSNSNKDFRRVVTVDGALFEKSGTMSGGGSKPRXXXXXXXXXXXXXXXEAVTN 181
            DQATRIAY   N DFRRVVT+DGALFEKSGTMSGGGSKPR               E V N
Sbjct: 667  DQATRIAYGR-NMDFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRSASVSAEVVAN 725

Query: 182  AEKELSKLVETLNDQRQKISDAVKCYQAADKAISHLQMELAKGEKEVESLRSQQLYLDKQ 361
            AEKELS +V  LND RQKI DAV+ YQA++KAI+H++MELAK +KE++SL S+  YL+KQ
Sbjct: 726  AEKELSTMVGKLNDIRQKIIDAVRSYQASEKAITHMEMELAKSQKEIDSLNSEHSYLEKQ 785

Query: 362  LETLKAASEPADDEVNRLKELKKIISAEEKELD 460
            L +L+AAS+P  DE++RLKELKKIIS+EE E+D
Sbjct: 786  LGSLEAASQPKKDELDRLKELKKIISSEEMEID 818


>ref|XP_002323859.1| condensin complex components subunit [Populus trichocarpa]
            gi|222866861|gb|EEF03992.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1256

 Score =  181 bits (459), Expect = 5e-44
 Identities = 95/153 (62%), Positives = 120/153 (78%)
 Frame = +2

Query: 2    DQATRIAYSNSNKDFRRVVTVDGALFEKSGTMSGGGSKPRXXXXXXXXXXXXXXXEAVTN 181
            DQATRIAY   N +FRRVVT+DGALFEKSGTMSGGG+KPR               EAVT+
Sbjct: 672  DQATRIAYGG-NLEFRRVVTLDGALFEKSGTMSGGGTKPRGGKMGTSIRATSVSGEAVTS 730

Query: 182  AEKELSKLVETLNDQRQKISDAVKCYQAADKAISHLQMELAKGEKEVESLRSQQLYLDKQ 361
            AEKELS +V+ LN  RQ+I+D+VK YQA++KAI+HL+MELAK +KE++SL ++  YL+KQ
Sbjct: 731  AEKELSTMVDRLNGIRQRIADSVKHYQASEKAIAHLEMELAKSQKEIDSLNTEHSYLEKQ 790

Query: 362  LETLKAASEPADDEVNRLKELKKIISAEEKELD 460
            L +LKAASEP  DE++RL+ELK+II  EEKE+D
Sbjct: 791  LGSLKAASEPKKDELDRLEELKRIIVTEEKEID 823


>ref|XP_003554891.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Glycine max]
          Length = 1242

 Score =  176 bits (446), Expect = 2e-42
 Identities = 92/153 (60%), Positives = 119/153 (77%)
 Frame = +2

Query: 2    DQATRIAYSNSNKDFRRVVTVDGALFEKSGTMSGGGSKPRXXXXXXXXXXXXXXXEAVTN 181
            DQATRIAY   N +FRRVVT+DGALFE SGTMSGGGSKPR               E+V N
Sbjct: 664  DQATRIAYGG-NTEFRRVVTLDGALFENSGTMSGGGSKPRGGKMGTSIRATSMSAESVAN 722

Query: 182  AEKELSKLVETLNDQRQKISDAVKCYQAADKAISHLQMELAKGEKEVESLRSQQLYLDKQ 361
            AEKELS+L   LND RQ+I  AV+ YQA++KA++ L+MELAK +KEV+SL+SQ  Y++KQ
Sbjct: 723  AEKELSRLTNKLNDFRQRIMAAVQHYQASEKAVAALEMELAKSQKEVDSLKSQYNYIEKQ 782

Query: 362  LETLKAASEPADDEVNRLKELKKIISAEEKELD 460
            L++L+AAS P +DE++R+KELKKI+SAEE+E++
Sbjct: 783  LDSLEAASMPQEDELDRMKELKKIVSAEEREIN 815


>ref|XP_003543852.1| PREDICTED: structural maintenance of chromosomes protein 4-like
            [Glycine max]
          Length = 1319

 Score =  176 bits (445), Expect = 2e-42
 Identities = 92/153 (60%), Positives = 118/153 (77%)
 Frame = +2

Query: 2    DQATRIAYSNSNKDFRRVVTVDGALFEKSGTMSGGGSKPRXXXXXXXXXXXXXXXEAVTN 181
            DQATRIAY   N +FRRVVT+DGALFE SGTMSGGG KPR               E+V N
Sbjct: 741  DQATRIAYGG-NTEFRRVVTLDGALFENSGTMSGGGGKPRGGKMGTSIRATSVSVESVAN 799

Query: 182  AEKELSKLVETLNDQRQKISDAVKCYQAADKAISHLQMELAKGEKEVESLRSQQLYLDKQ 361
            AEKELS+L + LND RQ+I  AV+ YQA++KA++ L+MELAK +KEV+SL SQ  Y++KQ
Sbjct: 800  AEKELSRLTDKLNDIRQRIMAAVQRYQASEKAVAALEMELAKSQKEVDSLNSQYNYIEKQ 859

Query: 362  LETLKAASEPADDEVNRLKELKKIISAEEKELD 460
            L++L+AAS P +DE++RLKELKKI+SAEE+E++
Sbjct: 860  LDSLEAASTPQEDELDRLKELKKIVSAEEREIN 892


>ref|NP_199671.1| structural maintenance of chromosomes protein 4 [Arabidopsis
            thaliana] gi|75333958|sp|Q9FJL0.1|SMC4_ARATH RecName:
            Full=Structural maintenance of chromosomes protein 4;
            Short=AtSMC4; Short=SMC protein 4; Short=SMC-4; AltName:
            Full=Chromosome-associated protein C; Short=AtCAP-C
            gi|10177350|dbj|BAB10693.1| chromosome condensation
            protein [Arabidopsis thaliana]
            gi|332008311|gb|AED95694.1| structural maintenance of
            chromosomes protein 4 [Arabidopsis thaliana]
          Length = 1241

 Score =  171 bits (432), Expect = 7e-41
 Identities = 89/153 (58%), Positives = 115/153 (75%)
 Frame = +2

Query: 2    DQATRIAYSNSNKDFRRVVTVDGALFEKSGTMSGGGSKPRXXXXXXXXXXXXXXXEAVTN 181
            DQATRIAY   N++FRRVV +DGALFEKSGTMSGGG K R               EAV N
Sbjct: 665  DQATRIAYGG-NREFRRVVALDGALFEKSGTMSGGGGKARGGRMGTSIRATGVSGEAVAN 723

Query: 182  AEKELSKLVETLNDQRQKISDAVKCYQAADKAISHLQMELAKGEKEVESLRSQQLYLDKQ 361
            AE ELSK+V+ LN+ R+K+ +AV+ Y+AA+  +S L+MELAK ++E+ESL S+  YL+KQ
Sbjct: 724  AENELSKIVDMLNNIREKVGNAVRQYRAAENEVSGLEMELAKSQREIESLNSEHNYLEKQ 783

Query: 362  LETLKAASEPADDEVNRLKELKKIISAEEKELD 460
            L +L+AAS+P  DE++RLKELKKIIS EEKE++
Sbjct: 784  LASLEAASQPKTDEIDRLKELKKIISKEEKEIE 816


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