BLASTX nr result

ID: Lithospermum22_contig00035099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035099
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   1e-10
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]    70   2e-10
emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]    64   1e-08
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    61   8e-08
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   2e-07

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 67.4 bits (163), Expect(2) = 1e-10
 Identities = 31/62 (50%), Positives = 39/62 (62%)
 Frame = -3

Query: 186  WKSRDVLCKDKHEGGLGFKDLECVNLALLAKQGWLVATKQAPLLFKLLKGRYFCRSSFIH 7
            W S D LC  K  GGLGF+DL C N +LLAKQ W + T    LL++LL+ RYF  S  + 
Sbjct: 841  WHSWDTLCYPKSMGGLGFRDLHCFNQSLLAKQAWRLCTGDQTLLYRLLQARYFKSSELLE 900

Query: 6    AK 1
            A+
Sbjct: 901  AR 902



 Score = 23.5 bits (49), Expect(2) = 1e-10
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -2

Query: 244 GIIDALNGLMEKVFWASTD 188
           G+ID ++ L+ + +W S+D
Sbjct: 816 GLIDEIHSLLARFWWGSSD 834


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/71 (47%), Positives = 43/71 (60%)
 Frame = -3

Query: 213 KRSSGLVRTWKSRDVLCKDKHEGGLGFKDLECVNLALLAKQGWLVATKQAPLLFKLLKGR 34
           K   G    W S D LC  K EGGLGF++L   NLA+L KQGW + TK   L+ +LLK R
Sbjct: 231 KSDGGRRINWLSWDKLCLRKEEGGLGFRNLRDFNLAMLGKQGWNLITKPDSLIARLLKAR 290

Query: 33  YFCRSSFIHAK 1
           Y+C   F+ A+
Sbjct: 291 YYCSRDFLSAR 301


>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/71 (45%), Positives = 41/71 (57%)
 Frame = -3

Query: 213 KRSSGLVRTWKSRDVLCKDKHEGGLGFKDLECVNLALLAKQGWLVATKQAPLLFKLLKGR 34
           K   G    W S D LC  K EGGLGF++    NLA+L KQGW + TK   L+ +LLK R
Sbjct: 350 KSDGGRRINWLSWDKLCLRKEEGGLGFRNXRDFNLAMLGKQGWNLITKPDSLIARLLKAR 409

Query: 33  YFCRSSFIHAK 1
           Y+    F+ A+
Sbjct: 410 YYRSGDFLSAR 420


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/62 (46%), Positives = 39/62 (62%)
 Frame = -3

Query: 186 WKSRDVLCKDKHEGGLGFKDLECVNLALLAKQGWLVATKQAPLLFKLLKGRYFCRSSFIH 7
           W S   +CK K +GGLGF+ L   NLALLAKQGW        L+ ++ + RYF  SSF++
Sbjct: 306 WMSWGKMCKQKKDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLN 365

Query: 6   AK 1
           A+
Sbjct: 366 AE 367


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/62 (43%), Positives = 41/62 (66%)
 Frame = -3

Query: 186  WKSRDVLCKDKHEGGLGFKDLECVNLALLAKQGWLVATKQAPLLFKLLKGRYFCRSSFIH 7
            W + + L   K EGGLG ++ +  N ALLAKQ W + TK   L+ +++KG+YF RS+F+ 
Sbjct: 847  WVAWEKLFLPKKEGGLGIRNFDVFNRALLAKQAWRILTKPDSLMARVIKGKYFPRSNFLE 906

Query: 6    AK 1
            A+
Sbjct: 907  AR 908


Top