BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035064
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi...   148   7e-34
ref|XP_002334407.1| predicted protein [Populus trichocarpa] gi|2...   145   8e-33
gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]                         132   4e-29
ref|NP_192066.2| pentatricopeptide repeat-containing protein [Ar...   132   4e-29
ref|XP_002515124.1| pentatricopeptide repeat-containing protein,...   128   1e-27

>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
           [Vitis vinifera]
          Length = 792

 Score =  148 bits (374), Expect = 7e-34
 Identities = 79/169 (46%), Positives = 116/169 (68%), Gaps = 1/169 (0%)
 Frame = +3

Query: 141 ATNAAKNGKTRFQDMLLVAYISNVLSQPGGTHTLETKADLITLSEDLVLEILRRNSLDVS 320
           +++AA     +  DMLLVA IS  LS+ G   T     + I +SE LV++IL RNS+DV 
Sbjct: 8   SSSAAAGAGVKLGDMLLVASISKTLSERG---TRSPDLESIPISESLVVQILGRNSIDVF 64

Query: 321 RRLEFFRWCSSRPNYKHSINAYVQLFKTICRY-QQFHDEIPGLVGLMRHEGLVLDPATFK 497
           R++EFFRWCS R NYKHS+ AY  +F+ +CR   +F D++P L+  M+ +G+V+   TFK
Sbjct: 65  RKVEFFRWCSFRHNYKHSVGAYSHIFRIVCRAGAEFLDQVPLLMSSMKDDGVVVGQETFK 124

Query: 498 LILDAFLVSGRFDVALELLDHMEENKLASDGLSTDVNNSIIIALIRKGQ 644
           L+LD+ + +G+FD ALE+LDH+EE      GL++ V +S+++ALIRK Q
Sbjct: 125 LLLDSLIRAGKFDSALEILDHIEE---LGTGLNSYVYDSVLVALIRKNQ 170


>ref|XP_002334407.1| predicted protein [Populus trichocarpa] gi|222872045|gb|EEF09176.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score =  145 bits (365), Expect = 8e-33
 Identities = 77/155 (49%), Positives = 112/155 (72%)
 Frame = +3

Query: 180 DMLLVAYISNVLSQPGGTHTLETKADLITLSEDLVLEILRRNSLDVSRRLEFFRWCSSRP 359
           ++LLVAY++  LS+  GT +L+   D I LSE LVL+ILRRNSLD S+++EFF+WCS R 
Sbjct: 3   NILLVAYLTKTLSE-SGTRSLDP--DSIPLSESLVLQILRRNSLDSSKKMEFFKWCSVRH 59

Query: 360 NYKHSINAYVQLFKTICRYQQFHDEIPGLVGLMRHEGLVLDPATFKLILDAFLVSGRFDV 539
            YKHS++ Y Q+F T+CR   + +E+P L+  M+++G+V+   TFKL+LDAF+ SG+FD 
Sbjct: 60  IYKHSVSTYSQMFSTLCR-SGYLEEVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGKFDS 118

Query: 540 ALELLDHMEENKLASDGLSTDVNNSIIIALIRKGQ 644
           AL++LDHMEE        +  + +SII+AL +K Q
Sbjct: 119 ALDILDHMEE---LGSNPNPHMYDSIIVALAKKNQ 150


>gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]
          Length = 508

 Score =  132 bits (333), Expect = 4e-29
 Identities = 78/169 (46%), Positives = 115/169 (68%), Gaps = 2/169 (1%)
 Frame = +3

Query: 138 SATNAAKNGK-TRFQDMLLVAYISNVLSQPGGTHTLETKADLITLSEDLVLEILRRNSLD 314
           S  + AKN    +  ++LLVA +S  LSQ  GT +L+  A+ I +SE +VL+ILRRNS+D
Sbjct: 14  SGLSPAKNSPFPQLCNVLLVASLSKTLSQ-SGTRSLD--ANSIPISEPVVLQILRRNSID 70

Query: 315 VSRRLEFFRWC-SSRPNYKHSINAYVQLFKTICRYQQFHDEIPGLVGLMRHEGLVLDPAT 491
            S++L+FFRWC S RP YKHS  AY Q+F+T+CR      E+P L+G M+ +G+ LD   
Sbjct: 71  PSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCR-TGLLGEVPDLLGSMKEDGVNLDQTM 129

Query: 492 FKLILDAFLVSGRFDVALELLDHMEENKLASDGLSTDVNNSIIIALIRK 638
            K++LD+ + SG+F+ AL +LD+MEE     D L+  V +S++IAL++K
Sbjct: 130 AKILLDSLIRSGKFESALGVLDYMEE---LGDCLNPSVYDSVLIALVKK 175


>ref|NP_192066.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75161629|sp|Q8VZE4.1|PP299_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g01570 gi|18086402|gb|AAL57659.1| AT4g01570/T15B16_21
           [Arabidopsis thaliana] gi|24797024|gb|AAN64524.1|
           At4g01570/T15B16_21 [Arabidopsis thaliana]
           gi|332656643|gb|AEE82043.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 805

 Score =  132 bits (333), Expect = 4e-29
 Identities = 78/169 (46%), Positives = 115/169 (68%), Gaps = 2/169 (1%)
 Frame = +3

Query: 138 SATNAAKNGK-TRFQDMLLVAYISNVLSQPGGTHTLETKADLITLSEDLVLEILRRNSLD 314
           S  + AKN    +  ++LLVA +S  LSQ  GT +L+  A+ I +SE +VL+ILRRNS+D
Sbjct: 14  SGLSPAKNSPFPQLCNVLLVASLSKTLSQ-SGTRSLD--ANSIPISEPVVLQILRRNSID 70

Query: 315 VSRRLEFFRWC-SSRPNYKHSINAYVQLFKTICRYQQFHDEIPGLVGLMRHEGLVLDPAT 491
            S++L+FFRWC S RP YKHS  AY Q+F+T+CR      E+P L+G M+ +G+ LD   
Sbjct: 71  PSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCR-TGLLGEVPDLLGSMKEDGVNLDQTM 129

Query: 492 FKLILDAFLVSGRFDVALELLDHMEENKLASDGLSTDVNNSIIIALIRK 638
            K++LD+ + SG+F+ AL +LD+MEE     D L+  V +S++IAL++K
Sbjct: 130 AKILLDSLIRSGKFESALGVLDYMEE---LGDCLNPSVYDSVLIALVKK 175


>ref|XP_002515124.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545604|gb|EEF47108.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 898

 Score =  128 bits (321), Expect = 1e-27
 Identities = 68/171 (39%), Positives = 104/171 (60%)
 Frame = +3

Query: 132 FSSATNAAKNGKTRFQDMLLVAYISNVLSQPGGTHTLETKADLITLSEDLVLEILRRNSL 311
           FS  ++ + +   + + +LLVA+++  LS+ G         D I LSE L+L+ILR+NSL
Sbjct: 35  FSLCSSLSSSSSNQLESILLVAFLNKALSESG---VRNLDPDFIPLSEPLILQILRQNSL 91

Query: 312 DVSRRLEFFRWCSSRPNYKHSINAYVQLFKTICRYQQFHDEIPGLVGLMRHEGLVLDPAT 491
           D S+++EFF+WCS   NYKHS   Y  +F+T+C    F +E+  L+  M+ +  ++   T
Sbjct: 92  DASKKIEFFKWCSFSHNYKHSACVYSHMFRTVCNAGYF-EEVRSLLNSMKDDCAIVGTGT 150

Query: 492 FKLILDAFLVSGRFDVALELLDHMEENKLASDGLSTDVNNSIIIALIRKGQ 644
           FK +LD F+  G FD ALELLD MEE       L+  + +S+++AL RK Q
Sbjct: 151 FKFLLDTFINLGNFDFALELLDVMEE---LGTNLNPHMYDSVLVALTRKNQ 198