BLASTX nr result

ID: Lithospermum22_contig00035056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00035056
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isof...   147   9e-34
ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isof...   147   9e-34
emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera]   147   9e-34
dbj|BAB10887.1| unnamed protein product [Arabidopsis thaliana]        147   1e-33
pdb|2CE0|A Chain A, Structure Of Oxidized Arabidopsis Thaliana C...   147   1e-33

>ref|XP_002277599.2| PREDICTED: cytochrome c6, chloroplastic isoform 1 [Vitis vinifera]
          Length = 167

 Score =  147 bits (371), Expect = 9e-34
 Identities = 66/82 (80%), Positives = 76/82 (92%)
 Frame = -2

Query: 378 LIQPGATLFVKDLQRNGVETEDEIYQITYYGKGRMPGFGEKCTPRGQCTFGPRLQDDEIK 199
           +IQPGATLF+KDLQRNGV+TE+EIY++TYYGKGRMPGFGE CTPRGQCTFG RLQ++EIK
Sbjct: 86  IIQPGATLFLKDLQRNGVDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFGARLQEEEIK 145

Query: 198 LLAEFVKLQADQGWSKIE*DGN 133
           LLAEFVKLQADQGW  +E  G+
Sbjct: 146 LLAEFVKLQADQGWPNLEISGD 167


>ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isoform 2 [Vitis vinifera]
           gi|297737964|emb|CBI27165.3| unnamed protein product
           [Vitis vinifera]
          Length = 173

 Score =  147 bits (371), Expect = 9e-34
 Identities = 66/82 (80%), Positives = 76/82 (92%)
 Frame = -2

Query: 378 LIQPGATLFVKDLQRNGVETEDEIYQITYYGKGRMPGFGEKCTPRGQCTFGPRLQDDEIK 199
           +IQPGATLF+KDLQRNGV+TE+EIY++TYYGKGRMPGFGE CTPRGQCTFG RLQ++EIK
Sbjct: 92  IIQPGATLFLKDLQRNGVDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFGARLQEEEIK 151

Query: 198 LLAEFVKLQADQGWSKIE*DGN 133
           LLAEFVKLQADQGW  +E  G+
Sbjct: 152 LLAEFVKLQADQGWPNLEISGD 173


>emb|CAN61634.1| hypothetical protein VITISV_008455 [Vitis vinifera]
          Length = 125

 Score =  147 bits (371), Expect = 9e-34
 Identities = 66/82 (80%), Positives = 76/82 (92%)
 Frame = -2

Query: 378 LIQPGATLFVKDLQRNGVETEDEIYQITYYGKGRMPGFGEKCTPRGQCTFGPRLQDDEIK 199
           +IQPGATLF+KDLQRNGV+TE+EIY++TYYGKGRMPGFGE CTPRGQCTFG RLQ++EIK
Sbjct: 44  IIQPGATLFLKDLQRNGVDTEEEIYRVTYYGKGRMPGFGENCTPRGQCTFGARLQEEEIK 103

Query: 198 LLAEFVKLQADQGWSKIE*DGN 133
           LLAEFVKLQADQGW  +E  G+
Sbjct: 104 LLAEFVKLQADQGWPNLEISGD 125


>dbj|BAB10887.1| unnamed protein product [Arabidopsis thaliana]
          Length = 151

 Score =  147 bits (370), Expect = 1e-33
 Identities = 65/80 (81%), Positives = 74/80 (92%)
 Frame = -2

Query: 378 LIQPGATLFVKDLQRNGVETEDEIYQITYYGKGRMPGFGEKCTPRGQCTFGPRLQDDEIK 199
           +IQPGATLF KDL+RNGV+TE+EIY++TY+GKGRMPGFGEKCTPRGQCTFGPRLQD+EIK
Sbjct: 72  IIQPGATLFTKDLERNGVDTEEEIYRVTYFGKGRMPGFGEKCTPRGQCTFGPRLQDEEIK 131

Query: 198 LLAEFVKLQADQGWSKIE*D 139
           LLAEFVK QADQGW  +  D
Sbjct: 132 LLAEFVKFQADQGWPTVSTD 151


>pdb|2CE0|A Chain A, Structure Of Oxidized Arabidopsis Thaliana Cytochrome 6a
           gi|112490147|pdb|2CE1|A Chain A, Structure Of Reduced
           Arabidopsis Thaliana Cytochrome 6a
          Length = 105

 Score =  147 bits (370), Expect = 1e-33
 Identities = 65/80 (81%), Positives = 74/80 (92%)
 Frame = -2

Query: 378 LIQPGATLFVKDLQRNGVETEDEIYQITYYGKGRMPGFGEKCTPRGQCTFGPRLQDDEIK 199
           +IQPGATLF KDL+RNGV+TE+EIY++TY+GKGRMPGFGEKCTPRGQCTFGPRLQD+EIK
Sbjct: 26  IIQPGATLFTKDLERNGVDTEEEIYRVTYFGKGRMPGFGEKCTPRGQCTFGPRLQDEEIK 85

Query: 198 LLAEFVKLQADQGWSKIE*D 139
           LLAEFVK QADQGW  +  D
Sbjct: 86  LLAEFVKFQADQGWPTVSTD 105


Top