BLASTX nr result

ID: Lithospermum22_contig00034981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034981
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537243.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   207   7e-52
ref|XP_003542493.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   206   1e-51
ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   206   2e-51
emb|CBI32617.3| unnamed protein product [Vitis vinifera]              206   2e-51
ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   206   2e-51

>ref|XP_003537243.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
          Length = 419

 Score =  207 bits (527), Expect = 7e-52
 Identities = 105/138 (76%), Positives = 118/138 (85%)
 Frame = +2

Query: 62  CREVSDLPLATVQTSIESLMLSISHSVLSGHGFXXXXXXXXXXNHLYVPELDRIVLKNKS 241
           CREV+DL L++VQ++IESL+L I+HS+LSGHGF          N LYVPELDRIVLK+KS
Sbjct: 62  CREVADLSLSSVQSNIESLILRIAHSILSGHGFSFDVPSRSAANQLYVPELDRIVLKDKS 121

Query: 242 TDRLFANVSTVRKTTITTRILQLIHQLCLKNIHVTKRDLFYTDVKLFQDQTQSDTVLDDV 421
           + R FAN+STVRK+ IT RILQLIHQLCLK IHVTKRDLFYTDVKLFQDQ QSD VLDDV
Sbjct: 122 SLRPFANISTVRKSAITARILQLIHQLCLKGIHVTKRDLFYTDVKLFQDQIQSDAVLDDV 181

Query: 422 SCILGCTRSSLNVVAAEK 475
           SC+LGCTRSSLNVVAAEK
Sbjct: 182 SCMLGCTRSSLNVVAAEK 199


>ref|XP_003542493.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
          Length = 417

 Score =  206 bits (525), Expect = 1e-51
 Identities = 104/138 (75%), Positives = 118/138 (85%)
 Frame = +2

Query: 62  CREVSDLPLATVQTSIESLMLSISHSVLSGHGFXXXXXXXXXXNHLYVPELDRIVLKNKS 241
           CREV+DL L++VQ++IESL+L I+HS+LSGHGF          N LYVPELDRIVLK+KS
Sbjct: 60  CREVADLSLSSVQSNIESLILRIAHSILSGHGFSFDVPSRSAANQLYVPELDRIVLKDKS 119

Query: 242 TDRLFANVSTVRKTTITTRILQLIHQLCLKNIHVTKRDLFYTDVKLFQDQTQSDTVLDDV 421
           + R FAN+STVRK+ IT RILQLIHQLC+K IHVTKRDLFYTDVKLFQDQ QSD VLDDV
Sbjct: 120 SLRPFANISTVRKSAITARILQLIHQLCIKGIHVTKRDLFYTDVKLFQDQIQSDAVLDDV 179

Query: 422 SCILGCTRSSLNVVAAEK 475
           SC+LGCTRSSLNVVAAEK
Sbjct: 180 SCMLGCTRSSLNVVAAEK 197


>ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
           gi|449521501|ref|XP_004167768.1| PREDICTED: DNA
           topoisomerase 6 subunit A-like [Cucumis sativus]
          Length = 420

 Score =  206 bits (524), Expect = 2e-51
 Identities = 102/138 (73%), Positives = 120/138 (86%)
 Frame = +2

Query: 62  CREVSDLPLATVQTSIESLMLSISHSVLSGHGFXXXXXXXXXXNHLYVPELDRIVLKNKS 241
           CREV+DL L++VQ +IES++L I+ S+LSG+GF          N LYVPELDRIVLK+K+
Sbjct: 63  CREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKDKT 122

Query: 242 TDRLFANVSTVRKTTITTRILQLIHQLCLKNIHVTKRDLFYTDVKLFQDQTQSDTVLDDV 421
             R +AN+STVRK+TITTRILQL+HQLC+KNIHVTKRDLFYTDVKLFQDQTQSD+VLDDV
Sbjct: 123 ALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDV 182

Query: 422 SCILGCTRSSLNVVAAEK 475
           SCILGCTRSSLNV+AAEK
Sbjct: 183 SCILGCTRSSLNVIAAEK 200


>emb|CBI32617.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  206 bits (523), Expect = 2e-51
 Identities = 102/138 (73%), Positives = 120/138 (86%)
 Frame = +2

Query: 62  CREVSDLPLATVQTSIESLMLSISHSVLSGHGFXXXXXXXXXXNHLYVPELDRIVLKNKS 241
           CREV+DL L++VQ++IE+L+L ++HS+LSG GF          N LYVPELDRIVLK+KS
Sbjct: 106 CREVADLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSANQLYVPELDRIVLKDKS 165

Query: 242 TDRLFANVSTVRKTTITTRILQLIHQLCLKNIHVTKRDLFYTDVKLFQDQTQSDTVLDDV 421
           + R FANVSTVRK+ +TTRILQLIHQLC KNIHVTKRDLFYTDVKLFQDQTQSD+VLDDV
Sbjct: 166 SLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDV 225

Query: 422 SCILGCTRSSLNVVAAEK 475
           SC+LGCTRSSLNV+A+EK
Sbjct: 226 SCMLGCTRSSLNVIASEK 243


>ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Vitis vinifera]
          Length = 420

 Score =  206 bits (523), Expect = 2e-51
 Identities = 102/138 (73%), Positives = 120/138 (86%)
 Frame = +2

Query: 62  CREVSDLPLATVQTSIESLMLSISHSVLSGHGFXXXXXXXXXXNHLYVPELDRIVLKNKS 241
           CREV+DL L++VQ++IE+L+L ++HS+LSG GF          N LYVPELDRIVLK+KS
Sbjct: 63  CREVADLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSANQLYVPELDRIVLKDKS 122

Query: 242 TDRLFANVSTVRKTTITTRILQLIHQLCLKNIHVTKRDLFYTDVKLFQDQTQSDTVLDDV 421
           + R FANVSTVRK+ +TTRILQLIHQLC KNIHVTKRDLFYTDVKLFQDQTQSD+VLDDV
Sbjct: 123 SLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDV 182

Query: 422 SCILGCTRSSLNVVAAEK 475
           SC+LGCTRSSLNV+A+EK
Sbjct: 183 SCMLGCTRSSLNVIASEK 200


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