BLASTX nr result

ID: Lithospermum22_contig00034946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034946
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515365.1| Cyclic nucleotide-gated ion channel, putativ...   121   7e-26
ref|XP_002324941.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
ref|XP_002272241.1| PREDICTED: probable cyclic nucleotide-gated ...   121   7e-26
emb|CAN83465.1| hypothetical protein VITISV_038667 [Vitis vinifera]   119   3e-25
emb|CBI24002.3| unnamed protein product [Vitis vinifera]              113   2e-23

>ref|XP_002515365.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223545309|gb|EEF46814.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 629

 Score =  121 bits (303), Expect = 7e-26
 Identities = 62/102 (60%), Positives = 74/102 (72%)
 Frame = +3

Query: 39  KKVPVYRASAPLLKSEGGFNEKVKGSGGPKFGRFKIFPEDSEPEKYEKWILDPGSEHVLQ 218
           K +P+Y  S  LLK+EG  ++   G   PK GRFK+FPE+ EP  + K ILDPG++  LQ
Sbjct: 19  KPLPLYTVSGQLLKAEGSASDPKTGHKFPKLGRFKVFPENHEP--WRKRILDPGTDVYLQ 76

Query: 219 WNRIFLFFCLVALFVDPLFFYLPSVVNDGNRNSSCMTTDLNL 344
           WNR+FLF CLVALFVDPLFFYLPSV N G   +SCM TDLNL
Sbjct: 77  WNRVFLFSCLVALFVDPLFFYLPSVANRG--VTSCMDTDLNL 116


>ref|XP_002324941.1| predicted protein [Populus trichocarpa] gi|222866375|gb|EEF03506.1|
           predicted protein [Populus trichocarpa]
          Length = 720

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/104 (55%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
 Frame = +3

Query: 36  NKKVPVYRASAPLLKSEGGF-NEKVKGSGGPKFGRFKIFPEDSEPEKYEKWILDPGSEHV 212
           +K +PV++ SA   K+EGG  N++      PKFGRFK+FPE++    + + ILDPGS+ +
Sbjct: 18  DKTLPVHKTSASFFKTEGGIINDRNTSDKVPKFGRFKVFPENNHEPYWREKILDPGSDVI 77

Query: 213 LQWNRIFLFFCLVALFVDPLFFYLPSVVNDGNRNSSCMTTDLNL 344
           L+WNR+FLF CL ALFVDPLFFYLPSV+++G   S+CM TDLNL
Sbjct: 78  LKWNRVFLFSCLTALFVDPLFFYLPSVISNG--KSTCMDTDLNL 119


>ref|XP_002272241.1| PREDICTED: probable cyclic nucleotide-gated ion channel 14 [Vitis
           vinifera]
          Length = 726

 Score =  121 bits (303), Expect = 7e-26
 Identities = 67/111 (60%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
 Frame = +3

Query: 21  WERKENKKV--PV-YRASAPLLKSEGGFNEKVKGSGGPKFGRFKIFPEDSEPEKYEKWIL 191
           WE+ E++ V  PV Y+    LL  EG   EK +  G   FGRFK+FPE  EP  + K IL
Sbjct: 18  WEKGESQPVERPVSYKVLPSLLNPEGRAGEKNRTYGTLSFGRFKVFPESHEP--WRKRIL 75

Query: 192 DPGSEHVLQWNRIFLFFCLVALFVDPLFFYLPSVVNDGNRNSSCMTTDLNL 344
           DPGS+  LQWNR+FLF CLVALFVDPLFFYLP+VV DG  NSSC+ TDLNL
Sbjct: 76  DPGSDIFLQWNRVFLFSCLVALFVDPLFFYLPTVVGDG--NSSCVKTDLNL 124


>emb|CAN83465.1| hypothetical protein VITISV_038667 [Vitis vinifera]
          Length = 731

 Score =  119 bits (298), Expect = 3e-25
 Identities = 66/111 (59%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
 Frame = +3

Query: 21  WERKENKKV--PV-YRASAPLLKSEGGFNEKVKGSGGPKFGRFKIFPEDSEPEKYEKWIL 191
           WE+ E++    PV Y+    LL  EG   EK +  G   FGRFK+FPE  EP  + K IL
Sbjct: 23  WEKGESQPXERPVSYKVLPSLLNPEGRAGEKNRTYGTLSFGRFKVFPESHEP--WRKRIL 80

Query: 192 DPGSEHVLQWNRIFLFFCLVALFVDPLFFYLPSVVNDGNRNSSCMTTDLNL 344
           DPGS+  LQWNR+FLF CLVALFVDPLFFYLP+VV DG  NSSC+ TDLNL
Sbjct: 81  DPGSDIFLQWNRVFLFSCLVALFVDPLFFYLPTVVGDG--NSSCVKTDLNL 129


>emb|CBI24002.3| unnamed protein product [Vitis vinifera]
          Length = 664

 Score =  113 bits (282), Expect = 2e-23
 Identities = 63/107 (58%), Positives = 73/107 (68%), Gaps = 3/107 (2%)
 Frame = +3

Query: 21  WERKENKKV--PV-YRASAPLLKSEGGFNEKVKGSGGPKFGRFKIFPEDSEPEKYEKWIL 191
           WE+ E++ V  PV Y+    LL  EG   EK +  G   FGRFK+FPE  EP  + K IL
Sbjct: 29  WEKGESQPVERPVSYKVLPSLLNPEGRAGEKNRTYGTLSFGRFKVFPESHEP--WRKRIL 86

Query: 192 DPGSEHVLQWNRIFLFFCLVALFVDPLFFYLPSVVNDGNRNSSCMTT 332
           DPGS+  LQWNR+FLF CLVALFVDPLFFYLP+VV DG  NSSC  T
Sbjct: 87  DPGSDIFLQWNRVFLFSCLVALFVDPLFFYLPTVVGDG--NSSCFRT 131


Top