BLASTX nr result

ID: Lithospermum22_contig00034944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034944
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545905.1| PREDICTED: ribosomal L1 domain-containing pr...    57   2e-06
ref|XP_003532945.1| PREDICTED: ribosomal L1 domain-containing pr...    57   2e-06
ref|XP_002876472.1| hypothetical protein ARALYDRAFT_486318 [Arab...    56   5e-06
ref|XP_002283850.1| PREDICTED: ribosomal L1 domain-containing pr...    56   5e-06
emb|CAN65947.1| hypothetical protein VITISV_020727 [Vitis vinifera]    56   5e-06

>ref|XP_003545905.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Glycine
           max]
          Length = 408

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = +1

Query: 4   SGTCHSXXXXXXXXXXXDEIVENVREAIDGVVEFVPKKWKGVGALHLKFSDSLAMPIF 177
           +GTC S           DEIVENV  AI+G+VE VPKKW  V +LHLK  +S+A+P++
Sbjct: 184 TGTC-SVVRVAKVRMERDEIVENVVAAIEGIVEVVPKKWGNVRSLHLKLLESVALPVY 240


>ref|XP_003532945.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Glycine
           max]
          Length = 407

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/58 (51%), Positives = 37/58 (63%)
 Frame = +1

Query: 4   SGTCHSXXXXXXXXXXXDEIVENVREAIDGVVEFVPKKWKGVGALHLKFSDSLAMPIF 177
           +GTC S           DEIVENV  AI+G VE VPKKW  V +LHLK  +SLA+P++
Sbjct: 184 TGTC-SVVRVAKVRMERDEIVENVVAAIEGAVEVVPKKWGNVRSLHLKLLESLALPVY 240


>ref|XP_002876472.1| hypothetical protein ARALYDRAFT_486318 [Arabidopsis lyrata subsp.
           lyrata] gi|297322310|gb|EFH52731.1| hypothetical protein
           ARALYDRAFT_486318 [Arabidopsis lyrata subsp. lyrata]
          Length = 422

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = +1

Query: 4   SGTCHSXXXXXXXXXXXDEIVENVREAIDGVVEFVPKKWKGVGALHLKFSDSLAMPIF 177
           +GTC S           +EI+ENV   ++GVVE +P KWK V +LHLK S+SLA+PI+
Sbjct: 205 TGTC-SVIKVGKLSMELNEIIENVMATLNGVVELLPNKWKYVRSLHLKLSESLALPIY 261


>ref|XP_002283850.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Vitis
           vinifera]
          Length = 394

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
 Frame = +1

Query: 4   SGTCHSXXXXXXXXXXXDEIVENVREAIDGVVEFVPKKWKGVGALHLKFSDSLAMPIF-G 180
           +GTC S           ++IVENV  AIDGVVE VPKK  GV +LHLK  +SLA+P++  
Sbjct: 186 TGTC-SVVRVGKLSMEKEQIVENVVAAIDGVVELVPKKLAGVRSLHLKLLESLALPVYQA 244

Query: 181 VSGLR-DDEGVMKR 219
           V  +R   EGV+++
Sbjct: 245 VPDMRLKIEGVLEK 258


>emb|CAN65947.1| hypothetical protein VITISV_020727 [Vitis vinifera]
          Length = 394

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
 Frame = +1

Query: 4   SGTCHSXXXXXXXXXXXDEIVENVREAIDGVVEFVPKKWKGVGALHLKFSDSLAMPIF-G 180
           +GTC S           ++IVENV  AIDGVVE VPKK  GV +LHLK  +SLA+P++  
Sbjct: 186 TGTC-SVVRVGKLSMEKEQIVENVVAAIDGVVELVPKKLAGVRSLHLKLLESLALPVYQA 244

Query: 181 VSGLR-DDEGVMKR 219
           V  +R   EGV+++
Sbjct: 245 VPDMRLKIEGVLEK 258


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