BLASTX nr result

ID: Lithospermum22_contig00034918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034918
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305331.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002532452.1| mads box protein, putative [Ricinus communis...    63   2e-08
ref|NP_850058.1| agamous-like MADS-box protein AGL61 [Arabidopsi...    63   3e-08
gb|AAD23028.1| putative MADS-box protein [Arabidopsis thaliana] ...    63   3e-08
ref|XP_002878805.1| predicted protein [Arabidopsis lyrata subsp....    61   8e-08

>ref|XP_002305331.1| predicted protein [Populus trichocarpa] gi|222848295|gb|EEE85842.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
 Frame = -2

Query: 308 EFSKLCGGDAAVLVRSPGGKPFSWGTPSVEHVINRYIGLN---NDDAHQNISSGSSVTTE 138
           E   LCG + AVLV SP GK FS+G PS+E V NR++G N   ND+ H  + +   V   
Sbjct: 40  ELVTLCGAEVAVLVFSPAGKAFSFGHPSIESVANRFLGQNIAPNDNTHPLVEAHRKVRIN 99

Query: 137 INGVCENMLVGEAMKEKEIGKKQSFEELKGDELFWWNKSIDDLDL 3
                 N L+ E   E++ GK       +     WW   ID+L L
Sbjct: 100 ELNQQHNELLSEMEAERDRGKVLKEGTSEKSSQGWWEAPIDELSL 144


>ref|XP_002532452.1| mads box protein, putative [Ricinus communis]
           gi|223527842|gb|EEF29938.1| mads box protein, putative
           [Ricinus communis]
          Length = 217

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
 Frame = -2

Query: 308 EFSKLCGGDAAVLVRSPGGKPFSWGTPSVEHVINRYIGLNNDDAHQNISSGSSVTTEING 129
           E S LCG   AVL  SPG K F++G P+VE V++RY+   N DA ++  +  +VT++   
Sbjct: 45  ELSLLCGAQVAVLAFSPGKKVFAFGHPNVETVLDRYLNEGNPDAKED--TAQTVTSDSPR 102

Query: 128 VCE-NMLVGEAMKEKEIGKK-----QSFEELKGDEL---FWWNKSIDDL 9
           V + N    +AMKE E  KK     + +++++   +   FWW++ +DD+
Sbjct: 103 VQQWNKEYEDAMKELEEEKKCLAMVEEWKKVRESNVNGGFWWDEPVDDM 151


>ref|NP_850058.1| agamous-like MADS-box protein AGL61 [Arabidopsis thaliana]
           gi|75339310|sp|Q4PSU4.1|AGL61_ARATH RecName:
           Full=Agamous-like MADS-box protein AGL61; AltName:
           Full=Protein DIANA gi|67633540|gb|AAY78694.1| MADS-box
           family protein [Arabidopsis thaliana]
           gi|330252541|gb|AEC07635.1| agamous-like MADS-box
           protein AGL61 [Arabidopsis thaliana]
          Length = 264

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
 Frame = -2

Query: 308 EFSKLCGGDAAVLVRSPGGKPFSWGTPSVEHVINRYIGLNNDD--AHQNISSGSSVTTEI 135
           E   LCG +  ++V SP  KPFS+G PSVE V++RY+  NN      Q +    + + E+
Sbjct: 95  ELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCEL 154

Query: 134 NGVCENMLVGEAMKEKEIGKKQSFEELKGDE-----LFWWNKSIDDLDL 3
           N    ++L  E  +EK+  K Q+ EE++ +      + WW K ++++++
Sbjct: 155 NMQLTHIL-SEVEEEKK--KGQAMEEMRKESVRRSMINWWEKPVEEMNM 200


>gb|AAD23028.1| putative MADS-box protein [Arabidopsis thaliana]
           gi|194272620|gb|ACF37253.1| MADS box protein AGL61
           [Arabidopsis thaliana] gi|225898140|dbj|BAH30402.1|
           hypothetical protein [Arabidopsis thaliana]
          Length = 210

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
 Frame = -2

Query: 308 EFSKLCGGDAAVLVRSPGGKPFSWGTPSVEHVINRYIGLNNDD--AHQNISSGSSVTTEI 135
           E   LCG +  ++V SP  KPFS+G PSVE V++RY+  NN      Q +    + + E+
Sbjct: 41  ELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCEL 100

Query: 134 NGVCENMLVGEAMKEKEIGKKQSFEELKGDE-----LFWWNKSIDDLDL 3
           N    ++L  E  +EK+  K Q+ EE++ +      + WW K ++++++
Sbjct: 101 NMQLTHIL-SEVEEEKK--KGQAMEEMRKESVRRSMINWWEKPVEEMNM 146


>ref|XP_002878805.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324644|gb|EFH55064.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 223

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
 Frame = -2

Query: 308 EFSKLCGGDAAVLVRSPGGKPFSWGTPSVEHVINRYIGLNNDDAHQNISSGSSVTTEING 129
           E   LCG +  ++V SP  KPFS+G PSVE V++RY+  NN    Q      S       
Sbjct: 55  ELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLDRYMSRNNMSLVQTQQPQGSPAAS--- 111

Query: 128 VCE-NMLVGEAMKEKEIGKK--QSFEELKGDE-----LFWWNKSIDDLDL 3
            CE NM +   + E E  KK  Q+ EE++ +      + WW K +++++L
Sbjct: 112 -CELNMQLTHILSEVEEEKKKGQAMEEMRKESVRRSMINWWEKPVEEMNL 160


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