BLASTX nr result
ID: Lithospermum22_contig00034766
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00034766
(342 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containi... 114 6e-24
ref|XP_002527661.1| pentatricopeptide repeat-containing protein,... 111 7e-23
ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|2... 96 3e-18
ref|XP_003612846.1| Pentatricopeptide repeat-containing protein ... 88 6e-16
tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea m... 86 2e-15
>ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product
[Vitis vinifera]
Length = 767
Score = 114 bits (286), Expect = 6e-24
Identities = 54/113 (47%), Positives = 76/113 (67%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
A +ILE+M+ +G S +VVTY I+GLCRVG+ E AL F+ + LVN CYN +IH
Sbjct: 274 ATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIH 333
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHM 339
LC++G+LD+AL+VLE+M +C I D +TY IL+ FC +E + L+E M
Sbjct: 334 GLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEM 386
Score = 74.7 bits (182), Expect = 7e-12
Identities = 40/114 (35%), Positives = 59/114 (51%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
A+K+LE+MK GIS V TY +IHG C+ G E L IE+M+ + Y+ + H
Sbjct: 344 ALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFH 403
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHMV 342
LC++ D +L + D+ D Y IL+ FC ++ A L+E MV
Sbjct: 404 GLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMV 457
Score = 65.1 bits (157), Expect = 6e-09
Identities = 34/114 (29%), Positives = 62/114 (54%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
A K++E+M + ++ + ++HG C++G AL+F M + G L + N +I
Sbjct: 449 AHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIID 508
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHMV 342
A CREG++++AL ++ +M T I + TY +++ C K E A+ L M+
Sbjct: 509 AHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLML 562
Score = 64.7 bits (156), Expect = 8e-09
Identities = 31/108 (28%), Positives = 57/108 (52%)
Frame = +1
Query: 10 ILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIHALC 189
++E+MK S + S+V+Y + HGLC+ +++L + G + Y+ +I C
Sbjct: 382 LIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFC 441
Query: 190 REGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLE 333
+G LD A +++E+M+ + D + LV FC K+ + V+ LE
Sbjct: 442 MQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFC---KMGLWVNALE 486
Score = 57.8 bits (138), Expect = 9e-07
Identities = 36/114 (31%), Positives = 53/114 (46%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
A++ M GI S+ T II CR G E AL + +M+ +G N YN VI+
Sbjct: 484 ALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVIN 543
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHMV 342
LC+E K ++AL + ML + Y L+D F + A+ L M+
Sbjct: 544 RLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARML 597
Score = 56.6 bits (135), Expect = 2e-06
Identities = 27/98 (27%), Positives = 51/98 (52%)
Frame = +1
Query: 46 SVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIHALCREGKLDKALRVL 225
+V Y IIHGLC+ G + ALK +E+M+ G + Y+ +IH C++G ++K L ++
Sbjct: 324 NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLI 383
Query: 226 EDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHM 339
E+M + +Y L C ++++ + +
Sbjct: 384 EEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDL 421
>ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532966|gb|EEF34732.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 766
Score = 111 bits (277), Expect = 7e-23
Identities = 53/114 (46%), Positives = 75/114 (65%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
A ++LE+M+++G S +VVTYG IHGLCR G E AL+ I +R Q +N+ CYN VIH
Sbjct: 272 ATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIH 331
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHMV 342
CR G+L +A +LEDM + I A++Y IL+D C ++E A+ L+E MV
Sbjct: 332 EFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMV 385
Score = 58.9 bits (141), Expect = 4e-07
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 35/148 (23%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVAL----------------------- 111
A+ ++E+M S + S+VTY + GLC+ G E++L
Sbjct: 377 ALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLIN 436
Query: 112 ------------KFIEQMRQEGQLVNNQCYNFVIHALCREGKLDKALRVLEDMLTCKIGA 255
K + +MR G + N+ +N +IH C+ +LDKAL V ML +
Sbjct: 437 GFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQL 496
Query: 256 DAHTYRILVDSFCNHDKIEVAVSLLEHM 339
+ T I+ D F A+ L+ +
Sbjct: 497 NIFTCNIMADEFNREGHFWEALKLINEV 524
>ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|222833858|gb|EEE72335.1|
predicted protein [Populus trichocarpa]
Length = 697
Score = 95.9 bits (237), Expect = 3e-18
Identities = 48/110 (43%), Positives = 71/110 (64%)
Frame = +1
Query: 10 ILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIHALC 189
ILE+M+ G + +VVTYG IHGLCRVG E A I+ +R Q +N CYN +I C
Sbjct: 212 ILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFC 271
Query: 190 REGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHM 339
++G+ D+AL++LE+M I D ++Y ILV++FC IE ++L++ M
Sbjct: 272 QKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEM 321
Score = 57.4 bits (137), Expect = 1e-06
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
Frame = +1
Query: 10 ILEDMKISGISSSVVTYGPIIHGLCRVGFP-----EVALKFIEQMRQEGQLVNNQCYNFV 174
+ +D+K SG S +V TY +I+ C+ E A +E+M ++G+ Y
Sbjct: 172 LFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVY 231
Query: 175 IHALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHM 339
IH LCR G ++ A ++D+ + + + Y L+ FC + + A+ LLE M
Sbjct: 232 IHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEM 286
>ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 892
Score = 88.2 bits (217), Expect = 6e-16
Identities = 44/113 (38%), Positives = 70/113 (61%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
A +IL + +SG + +VVTYG I GLC+VG VA + I+ + ++ Q +NN C+N VI+
Sbjct: 229 ASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIY 288
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHM 339
LC+ G LD+A V ++M I D ++Y IL+D FC +++ A + + M
Sbjct: 289 GLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEM 341
Score = 84.0 bits (206), Expect = 1e-14
Identities = 42/113 (37%), Positives = 64/113 (56%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
A ++ ++MK SGI V +Y +I G CR G + A + ++MR G L N Y+ +I
Sbjct: 299 ASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILID 358
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHM 339
C+EG++DKAL V E+M I D ++Y IL+D FC ++ A+ E M
Sbjct: 359 GFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEM 411
Score = 59.7 bits (143), Expect = 2e-07
Identities = 28/97 (28%), Positives = 53/97 (54%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
A ++ ++M+ SGI ++ +Y +I G C+ G + AL+ E+M+ G L + Y+ +I
Sbjct: 334 ASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILID 393
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSF 291
CR+G +D A++ E+M + A Y L+ +
Sbjct: 394 GFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGY 430
>tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 86.3 bits (212), Expect = 2e-15
Identities = 39/114 (34%), Positives = 73/114 (64%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
AV++L++M+ G + ++VTY ++H CR G + A ++QM +G +N+Q YN +I+
Sbjct: 367 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIY 426
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHMV 342
ALC++GKLD+A R++++M + D TY ++ CN+D +E A + +++
Sbjct: 427 ALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLI 480
Score = 69.3 bits (168), Expect = 3e-10
Identities = 35/114 (30%), Positives = 59/114 (51%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
A +++++MK G + TY +I+ LC E A + +EG + N YN +IH
Sbjct: 437 ATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIH 496
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHMV 342
AL R G+ + LR+ +ML D +Y L+ + C ++ +++LLE MV
Sbjct: 497 ALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMV 550
Score = 66.2 bits (160), Expect = 3e-09
Identities = 33/112 (29%), Positives = 61/112 (54%)
Frame = +1
Query: 4 VKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIHA 183
+++ +M + G V++Y +I LC+ G + ++ +E+M +G NN YN +I+
Sbjct: 508 LRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINE 567
Query: 184 LCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHM 339
LC+ GK+ AL + ++ML + D TY L++ C A++LLE +
Sbjct: 568 LCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 619
Score = 65.5 bits (158), Expect = 4e-09
Identities = 34/114 (29%), Positives = 64/114 (56%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
A I ++ G+ ++ +TY +IH L R G + L+ +M G ++ YN +I
Sbjct: 472 AEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIK 531
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHMV 342
ALC+EG +D+++ +LE+M+T I + +Y +L++ C K+ A+ L + M+
Sbjct: 532 ALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 585
Score = 65.1 bits (157), Expect = 6e-09
Identities = 32/113 (28%), Positives = 60/113 (53%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
A ++ E M G V TY ++HGLC++G A++ +++M ++G N Y+ ++H
Sbjct: 332 ATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLH 391
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHM 339
+ CR G D A +L+ ML ++ Y ++ + C K++ A L++ M
Sbjct: 392 SFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEM 444
Score = 58.2 bits (139), Expect = 7e-07
Identities = 37/113 (32%), Positives = 55/113 (48%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
A ++++ M G SVVTYG ++ GLCR + A + ++ + VN N VI
Sbjct: 266 AARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPE----VNVVMLNTVIR 321
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHM 339
EGKL +A + E M + D HTY IL+ C + AV +L+ M
Sbjct: 322 GCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEM 374
Score = 57.4 bits (137), Expect = 1e-06
Identities = 33/114 (28%), Positives = 58/114 (50%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
++ +LE+M GI + +Y +I+ LC+ G AL+ ++M +G + YN +I+
Sbjct: 542 SMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLIN 601
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSFCNHDKIEVAVSLLEHMV 342
LC+ G AL +LE + + D TY IL+ C ++ A LL+ +
Sbjct: 602 GLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAI 655
Score = 55.1 bits (131), Expect = 6e-06
Identities = 28/97 (28%), Positives = 55/97 (56%)
Frame = +1
Query: 1 AVKILEDMKISGISSSVVTYGPIIHGLCRVGFPEVALKFIEQMRQEGQLVNNQCYNFVIH 180
A+++ ++M G++ +VTY +I+GLC+VG+ AL +E++ E + YN +I
Sbjct: 577 ALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 636
Query: 181 ALCREGKLDKALRVLEDMLTCKIGADAHTYRILVDSF 291
C+ LD A +L+ ++ I + T+ ++V +F
Sbjct: 637 WHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNF 673