BLASTX nr result

ID: Lithospermum22_contig00034697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034697
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera]    62   5e-08
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    62   5e-08
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]      61   8e-08
gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo...    61   1e-07
gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi...    61   1e-07

>emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera]
          Length = 1936

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/120 (28%), Positives = 57/120 (47%)
 Frame = -3

Query: 361  VGFYKELFAASDDSQVRYDEELGNIIHKKIDAEDVVTLQXXXXXXXXXXXITSMRKGNAP 182
            V  Y+ L + + D    +  ++G ++ K+I   +   L+           +  M    AP
Sbjct: 1109 VNAYQHLLSENSD----WKADIGGLVLKQISLSEADALELPFSEAEIYAALMGMNGDKAP 1164

Query: 181  GPDGFTVEFFQHSWSVVKEDTVEAIKTFFCNQLYA*VLK*H*CCLVPKTECPQTMRDFRP 2
            GPDGFTV F+Q+ W +VKED ++  K F+    +   L      L+PK    + + D+RP
Sbjct: 1165 GPDGFTVAFWQNCWEIVKEDVLDMFKEFYDQNSFIKSLNHTFLVLIPKKGGAEDLGDYRP 1224


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
 Frame = -3

Query: 373  KAEAVGFYKELFAA--SDDSQVRYDEELGNIIHKKIDAEDVVTLQXXXXXXXXXXXITSM 200
            K EAV F+ +L ++  SD + +  DE L  I+  +    +   L              S+
Sbjct: 673  KIEAVRFFSDLLSSQPSDFTGISVDE-LKGILQYRYSLHEQNLLVAEITEAEVMKVFFSI 731

Query: 199  RKGNAPGPDGFTVEFFQHSWSVVKEDTVEAIKTFFCNQLYA*VLK*H*CCLVPKTECPQT 20
                +PGPDG+TVEFF+ +WSV+ ++   AIK+FF        L      L+PK    + 
Sbjct: 732  PLNKSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNSTILALIPKRTYAKE 791

Query: 19   MRDFRP 2
            M+D+RP
Sbjct: 792  MKDYRP 797


>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
          Length = 381

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/122 (31%), Positives = 59/122 (48%)
 Frame = -3

Query: 367 EAVGFYKELFAASDDSQVRYDEELGNIIHKKIDAEDVVTLQXXXXXXXXXXXITSMRKGN 188
           EA+ ++ E+F +S    ++  + LGNI ++ +  E    L            + S+    
Sbjct: 190 EALRYFSEIFTSSLQGNIQ--DSLGNI-NRVVSDECNAYLSRDVTAEEVRISVFSIGATR 246

Query: 187 APGPDGFTVEFFQHSWSVVKEDTVEAIKTFFCNQLYA*VLK*H*CCLVPKTECPQTMRDF 8
           APGPDG T  F+Q  W +V    VE ++ FF    +   L     CL+PK   P TM+DF
Sbjct: 247 APGPDGLTASFYQTYWDIVGPAVVEEVRHFFNTGEFYSDLNHTNLCLIPKITNPITMKDF 306

Query: 7   RP 2
           RP
Sbjct: 307 RP 308


>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
          Length = 1256

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/62 (43%), Positives = 40/62 (64%)
 Frame = -3

Query: 187 APGPDGFTVEFFQHSWSVVKEDTVEAIKTFFCNQLYA*VLK*H*CCLVPKTECPQTMRDF 8
           APGPDGF   F+Q +W+++K+D V A++ FF +      +      L+PKTE PQ ++DF
Sbjct: 524 APGPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLIPKTEQPQELKDF 583

Query: 7   RP 2
           RP
Sbjct: 584 RP 585


>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
          Length = 633

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/62 (43%), Positives = 40/62 (64%)
 Frame = -3

Query: 187 APGPDGFTVEFFQHSWSVVKEDTVEAIKTFFCNQLYA*VLK*H*CCLVPKTECPQTMRDF 8
           APGPDGF   F+Q +W+++K+D V A++ FF +      +      L+PKTE PQ ++DF
Sbjct: 524 APGPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLIPKTEQPQELKDF 583

Query: 7   RP 2
           RP
Sbjct: 584 RP 585


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