BLASTX nr result

ID: Lithospermum22_contig00034691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034691
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263521.1| PREDICTED: translocase of chloroplast 90, ch...   254   3e-65
ref|XP_003541485.1| PREDICTED: translocase of chloroplast 90, ch...   238   2e-60
ref|XP_003549731.1| PREDICTED: translocase of chloroplast 90, ch...   235   1e-59
ref|XP_002873990.1| hypothetical protein ARALYDRAFT_910069 [Arab...   229   1e-57
ref|XP_003609438.1| Translocase of chloroplast [Medicago truncat...   228   2e-57

>ref|XP_002263521.1| PREDICTED: translocase of chloroplast 90, chloroplastic-like [Vitis
            vinifera]
          Length = 798

 Score =  254 bits (649), Expect = 3e-65
 Identities = 139/261 (53%), Positives = 184/261 (70%), Gaps = 1/261 (0%)
 Frame = +3

Query: 279  MMSIKDWVLSQIVSNSIASSRPLSASESFFSGQRQALEVENDDEGISLSANNDTPLVSSG 458
            M SIKDWV SQI+S S+ SSRPL  S  FF+   ++L+ E  D G   + N   P   + 
Sbjct: 1    MKSIKDWVFSQIISKSLVSSRPLPGSTGFFA--EESLDEEFGDRGSDHTTNLVAPPAPAN 58

Query: 459  TIQAPSNDVENQ-NVMFHPGTVDSSLQSALHVDEKTLGPLERIEGLQIKFLRVLQRFGMP 635
            T    +++ ENQ +    P   + S  S    D K + PL ++E LQ+KFLR+L+R G  
Sbjct: 59   TSHHSNSNQENQLHSSPQPVPGEGSYLSHHGTDGKRMDPLSKVEDLQVKFLRLLRRIGQS 118

Query: 636  VNDPLVSKVLYRVHLATLIRGNDSDLKSANLRSDRARAIAAEQDLLGLPTPDFSFRILVL 815
             ++ +V+KVLYR+ LATLI   +SDLK ANLRS +ARAIA EQ+  GLP  DFSFRILVL
Sbjct: 119  QDNLVVAKVLYRLQLATLIGAGESDLKRANLRSGKARAIAEEQEAAGLPELDFSFRILVL 178

Query: 816  GKTGVGKSSTINSILNQAKSTTDAFQPATKCVQEIEETLNGIKISFIDTPGLLPSSPTTL 995
            GKTGVGKS+TINSI +QAK+ T+AFQPAT  ++E+  T+NGIKI+FIDTPGLLPS+ + +
Sbjct: 179  GKTGVGKSATINSIFDQAKAVTNAFQPATDRIREVVGTVNGIKITFIDTPGLLPSNTSNV 238

Query: 996  RRNKRILSAVKKFVRKSPPDM 1058
            RRN++IL +VK+F+RK PPD+
Sbjct: 239  RRNRKILLSVKRFIRKFPPDI 259


>ref|XP_003541485.1| PREDICTED: translocase of chloroplast 90, chloroplastic-like [Glycine
            max]
          Length = 795

 Score =  238 bits (606), Expect = 2e-60
 Identities = 128/262 (48%), Positives = 175/262 (66%), Gaps = 2/262 (0%)
 Frame = +3

Query: 279  MMSIKDWVLSQIVSNSIASSRPLSASESFFSGQRQALEVEN-DDEGISLSANNDTPLVSS 455
            M  ++DWV SQI+S S+ S  PLS S S ++G+ +    EN +++G   SAN+ +  + S
Sbjct: 1    MKGVRDWVFSQILSKSLVSPSPLSGSNSLYAGEHRN---ENFNEQGSDHSANSVSSPIPS 57

Query: 456  GTIQAPSNDVENQNVMFHPGTVDSSLQSALH-VDEKTLGPLERIEGLQIKFLRVLQRFGM 632
             +  +   D  NQ+        D+ +    H  + +    L ++E LQ+KF R+LQR G 
Sbjct: 58   NSSNSSYGDQSNQHSSSLQLVSDTEIYQYQHNTNGRRKDTLAKVEELQVKFFRLLQRLGQ 117

Query: 633  PVNDPLVSKVLYRVHLATLIRGNDSDLKSANLRSDRARAIAAEQDLLGLPTPDFSFRILV 812
               + LV+KVLYR+HLATLIR  + DLK  N  S  ARAIA+EQ+  G+P  DFS RILV
Sbjct: 118  SQENLLVAKVLYRMHLATLIRAKELDLKRVNHISSSARAIASEQEATGMPQLDFSCRILV 177

Query: 813  LGKTGVGKSSTINSILNQAKSTTDAFQPATKCVQEIEETLNGIKISFIDTPGLLPSSPTT 992
            LGKTGVGKS+TINSI  QAK+TT AFQPAT C+QE+   +NG+ I+FIDTPG LPSS   
Sbjct: 178  LGKTGVGKSATINSIFGQAKTTTGAFQPATNCIQEVVGNVNGLNIAFIDTPGFLPSSTNN 237

Query: 993  LRRNKRILSAVKKFVRKSPPDM 1058
            ++RNKRI+ ++K+F+RKSPPD+
Sbjct: 238  MKRNKRIMLSIKRFIRKSPPDI 259


>ref|XP_003549731.1| PREDICTED: translocase of chloroplast 90, chloroplastic-like [Glycine
            max]
          Length = 796

 Score =  235 bits (600), Expect = 1e-59
 Identities = 124/261 (47%), Positives = 176/261 (67%), Gaps = 1/261 (0%)
 Frame = +3

Query: 279  MMSIKDWVLSQIVSNSIASSRPLSASESFFSGQRQALEVENDDEGISLSANNDTPLVSSG 458
            M  ++DWV SQI+S S+ S  PLSAS S ++G+ +  +V  +++G   SA++ +  + S 
Sbjct: 1    MKGVRDWVFSQILSKSLVSPSPLSASNSLYAGEHRNGDV--NEQGSDHSASSVSSPIPSD 58

Query: 459  TIQAPSNDVENQNVMFHPGTVDSSLQSALH-VDEKTLGPLERIEGLQIKFLRVLQRFGMP 635
            +  +   D  NQ+        D+ +    H  + +    L ++E LQ+KF R+LQR G  
Sbjct: 59   SSNSSYGDQSNQHSSSLQLVSDTEIYQYQHNTNGRRKDTLAKVEELQVKFFRLLQRLGQS 118

Query: 636  VNDPLVSKVLYRVHLATLIRGNDSDLKSANLRSDRARAIAAEQDLLGLPTPDFSFRILVL 815
              + LV+KVLYR+HLA+LIR  +SDLK  N  S RARAIA+EQ+  G+P  DF  RILVL
Sbjct: 119  RENFLVAKVLYRMHLASLIRAKESDLKRVNHSSSRARAIASEQEATGMPQLDFCCRILVL 178

Query: 816  GKTGVGKSSTINSILNQAKSTTDAFQPATKCVQEIEETLNGIKISFIDTPGLLPSSPTTL 995
            GKTGVGKS+TINSI  QAK+TT AFQPAT C+QE+   +NG+ ++FIDTPG LPSS   +
Sbjct: 179  GKTGVGKSATINSIFGQAKTTTGAFQPATNCIQEVVGNVNGLNLTFIDTPGFLPSSTNNM 238

Query: 996  RRNKRILSAVKKFVRKSPPDM 1058
            +RNKR++ ++K+F+RKS PD+
Sbjct: 239  KRNKRVMLSIKRFIRKSSPDI 259


>ref|XP_002873990.1| hypothetical protein ARALYDRAFT_910069 [Arabidopsis lyrata subsp.
            lyrata] gi|297319827|gb|EFH50249.1| hypothetical protein
            ARALYDRAFT_910069 [Arabidopsis lyrata subsp. lyrata]
          Length = 786

 Score =  229 bits (583), Expect = 1e-57
 Identities = 127/261 (48%), Positives = 178/261 (68%), Gaps = 1/261 (0%)
 Frame = +3

Query: 279  MMSIKDWVLSQIVSNSIASSRPLSASESFFSGQRQALEVENDDEGISLSANNDTPLVSSG 458
            M   KDWV +  +SNS+ASSRPL  S+ FF   R + E +N  +  +       P+ S  
Sbjct: 1    MKGFKDWVFA--LSNSMASSRPLLGSDPFF---RDSQEQDNQSQVPAAPE----PVTSLE 51

Query: 459  TIQAPSNDVENQNVMFHPGT-VDSSLQSALHVDEKTLGPLERIEGLQIKFLRVLQRFGMP 635
               + S DVE Q  +      ++S  QS++ ++ K   PL +I  LQ++FLR++QRFG  
Sbjct: 52   APCSTSGDVEIQPPLSQQQVPLESLYQSSIDLNGKKHNPLAKIGDLQVQFLRLVQRFGQS 111

Query: 636  VNDPLVSKVLYRVHLATLIRGNDSDLKSANLRSDRARAIAAEQDLLGLPTPDFSFRILVL 815
             N+ LVSKVLYRVHLA LIR  +S+LK+  LR DRA+A+A EQ+L G P  DFS RIL+L
Sbjct: 112  QNNILVSKVLYRVHLALLIRAEESELKTVKLRQDRAKALAREQELSGTPELDFSLRILIL 171

Query: 816  GKTGVGKSSTINSILNQAKSTTDAFQPATKCVQEIEETLNGIKISFIDTPGLLPSSPTTL 995
            GKTGVGKS+TINSI  Q+KS TDAF+PAT  ++E+  T+NG+K++FIDTPG  P S ++ 
Sbjct: 172  GKTGVGKSATINSIFGQSKSETDAFRPATDRIEEVMGTVNGVKVTFIDTPGFHPLSSSST 231

Query: 996  RRNKRILSAVKKFVRKSPPDM 1058
            R+N++IL ++K++V+K PPD+
Sbjct: 232  RKNRKILLSIKRYVKKRPPDV 252


>ref|XP_003609438.1| Translocase of chloroplast [Medicago truncatula]
            gi|355510493|gb|AES91635.1| Translocase of chloroplast
            [Medicago truncatula]
          Length = 835

 Score =  228 bits (581), Expect = 2e-57
 Identities = 122/264 (46%), Positives = 169/264 (64%)
 Frame = +3

Query: 267  G*GNMMSIKDWVLSQIVSNSIASSRPLSASESFFSGQRQALEVENDDEGISLSANNDTPL 446
            G G M   +DWV SQ++SNS+ S  PLS S + +   R + ++ +     S++       
Sbjct: 48   GLGRMKGFRDWVFSQLLSNSLISPTPLSGSNTLYLEDRPSQDLNDQAHTHSVALP----- 102

Query: 447  VSSGTIQAPSNDVENQNVMFHPGTVDSSLQSALHVDEKTLGPLERIEGLQIKFLRVLQRF 626
            + SGT  + +N     +      +     QS    + +    L ++E LQ+KF R+LQR 
Sbjct: 103  IPSGTSNSSANQSNQSSSTLQQASDAEIYQSQHSGNGRRKDTLAKVEDLQVKFFRLLQRL 162

Query: 627  GMPVNDPLVSKVLYRVHLATLIRGNDSDLKSANLRSDRARAIAAEQDLLGLPTPDFSFRI 806
            G    + LV+KVLYR+HLATLIR  ++DL+  NL S  AR IA + +   +P  DFS RI
Sbjct: 163  GQSKENLLVAKVLYRMHLATLIRAEETDLQRVNLSSSGAREIANQHEAADMPQLDFSCRI 222

Query: 807  LVLGKTGVGKSSTINSILNQAKSTTDAFQPATKCVQEIEETLNGIKISFIDTPGLLPSSP 986
            LVLGKTGVGKS+TINSI +Q K+TT+AFQPAT C+QEI  T+NG+ I+FIDTPG LPSS 
Sbjct: 223  LVLGKTGVGKSATINSIFDQEKATTNAFQPATDCIQEIVGTVNGLNITFIDTPGFLPSST 282

Query: 987  TTLRRNKRILSAVKKFVRKSPPDM 1058
              ++RNKRI+ +VK+F+RKSPPD+
Sbjct: 283  NNVKRNKRIMLSVKRFIRKSPPDI 306


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