BLASTX nr result

ID: Lithospermum22_contig00034589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034589
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316375.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|NP_200879.1| C3H4 type zinc finger protein [Arabidopsis thal...    64   2e-08
ref|XP_003556237.1| PREDICTED: uncharacterized protein LOC100818...    63   2e-08
ref|XP_002314287.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
gb|AAM53301.1| putative protein [Arabidopsis thaliana] gi|231983...    63   2e-08

>ref|XP_002316375.1| predicted protein [Populus trichocarpa] gi|222865415|gb|EEF02546.1|
           predicted protein [Populus trichocarpa]
          Length = 714

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 12/79 (15%)
 Frame = -3

Query: 202 MGSKWRKVKVALGLNLCRYVPRS----------EVNDEDECWTSIHSSAPSTPNPLA--L 59
           MGSKWRK K+ALGLNLC YVPR+           ++D          S P TP P +  L
Sbjct: 1   MGSKWRKAKLALGLNLCVYVPRTLDDSAAPSSERLSDAALLSPKNWDSRPMTPTPSSHGL 60

Query: 58  KLTKSFSRSSKKICSICLA 2
           +L KS S+SSK+ CSICLA
Sbjct: 61  RLAKSGSKSSKQTCSICLA 79


>ref|NP_200879.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
           gi|9759335|dbj|BAB09844.1| retroelement pol
           polyprotein-like [Arabidopsis thaliana]
           gi|332009986|gb|AED97369.1| C3H4 type zinc finger
           protein [Arabidopsis thaliana]
          Length = 704

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 10/76 (13%)
 Frame = -3

Query: 202 MGSKWRKVKVALGLNLCRYVPRS-------EVNDEDECWTSIHSSAPSTPNPLA--LKLT 50
           MGSKWRK KVALGLNLC YVP++         +D+    + +    PSTP P +  L+L 
Sbjct: 1   MGSKWRKAKVALGLNLCLYVPKTLEDSSPPRRSDDAVSLSPVIVQRPSTPTPSSSGLRLP 60

Query: 49  KSFSR-SSKKICSICL 5
           +S S+ SSKK C+ICL
Sbjct: 61  RSMSKSSSKKTCAICL 76


>ref|XP_003556237.1| PREDICTED: uncharacterized protein LOC100818239 [Glycine max]
          Length = 731

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 19/85 (22%)
 Frame = -3

Query: 202 MGSKWRKVKVALGLNLCRYVPRSEVNDEDECWT-----------------SIHSSAPSTP 74
           MGSKW+K KVALGLNLC +VPR+ ++D+    T                 S  SS P+TP
Sbjct: 1   MGSKWKKAKVALGLNLCMFVPRT-LDDDSPPHTVVSERLSDATLLSPANWSTSSSRPTTP 59

Query: 73  --NPLALKLTKSFSRSSKKICSICL 5
             +   LKL+KS S+SSK+ CSICL
Sbjct: 60  VSSFHGLKLSKSSSKSSKQTCSICL 84


>ref|XP_002314287.1| predicted protein [Populus trichocarpa] gi|222850695|gb|EEE88242.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
 Frame = -3

Query: 202 MGSKWRKVKVALGLNLCRYVPRSEVNDEDECWT---------SIHSSAPSTPNPLALKLT 50
           MGSKWRK K+ALGLN+C YVP ++V   D   +         S H S   TP+   L+L+
Sbjct: 1   MGSKWRKAKLALGLNMCLYVPPTDVEQRDSSSSPSPARLFSRSSHGSTTPTPSSSGLRLS 60

Query: 49  KSFSRSSKKICSICL 5
            S   ++K+ C+ICL
Sbjct: 61  TSPDSNNKRTCAICL 75


>gb|AAM53301.1| putative protein [Arabidopsis thaliana] gi|23198328|gb|AAN15691.1|
           putative protein [Arabidopsis thaliana]
          Length = 704

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 10/76 (13%)
 Frame = -3

Query: 202 MGSKWRKVKVALGLNLCRYVPRS-------EVNDEDECWTSIHSSAPSTPNPLA--LKLT 50
           MGSKWRK KVALGLNLC Y+P++         +D+    + +    PSTP P +  L+L 
Sbjct: 1   MGSKWRKAKVALGLNLCLYIPKTLEDSSPPRRSDDAVSLSPVIVQRPSTPTPSSSGLRLP 60

Query: 49  KSFSR-SSKKICSICL 5
           +S S+ SSKK C+ICL
Sbjct: 61  RSMSKSSSKKTCAICL 76


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