BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034554
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190540.1| pentatricopeptide repeat-containing protein [Ar...   107   1e-21
ref|XP_002875992.1| pentatricopeptide repeat-containing protein ...   105   3e-21
ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
emb|CBI29560.3| unnamed protein product [Vitis vinifera]              103   2e-20

>ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g49710 gi|6723416|emb|CAB66909.1| putative protein
           [Arabidopsis thaliana] gi|332645058|gb|AEE78579.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 721

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/77 (62%), Positives = 60/77 (77%)
 Frame = -3

Query: 243 SGVITACSGNLDMIRQLHCLALKGGHGSYCSVNNTLITYYSKIGILDEAKRIFYGMGEAK 64
           SG+I AC   +D+I+QLHC ++ GG  SY SVNN  +TYYSK G+L EA  +FYGM E +
Sbjct: 144 SGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELR 203

Query: 63  DEVTWNSMIVAYGQNKE 13
           DEV+WNSMIVAYGQ+KE
Sbjct: 204 DEVSWNSMIVAYGQHKE 220


>ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321830|gb|EFH52251.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 721

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/77 (62%), Positives = 59/77 (76%)
 Frame = -3

Query: 243 SGVITACSGNLDMIRQLHCLALKGGHGSYCSVNNTLITYYSKIGILDEAKRIFYGMGEAK 64
           SG+I AC   +D+I+QLHC A+ GG  SY SVNN  +TYYSK G+L EA  +FYGM   +
Sbjct: 144 SGLIAACCDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLR 203

Query: 63  DEVTWNSMIVAYGQNKE 13
           DEV+WNSMIVAYGQ+KE
Sbjct: 204 DEVSWNSMIVAYGQHKE 220


>ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|222861445|gb|EEE98987.1|
           predicted protein [Populus trichocarpa]
          Length = 720

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/83 (62%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
 Frame = -3

Query: 246 FSGVITACSGNLDMIRQLHCLALKGGHGSYCSVNNTLITYYSKIGILDEAKRIFYGMG-E 70
           FSGVITAC  ++ +IRQLH LA   G  SY SV N+L+TYYSK GIL+EA+ +F GMG E
Sbjct: 143 FSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEE 202

Query: 69  AKDEVTWNSMIVAYGQNKERMMA 1
            +DEV+WNSMIVAYGQ+K  + A
Sbjct: 203 VRDEVSWNSMIVAYGQHKRGLKA 225


>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/77 (62%), Positives = 60/77 (77%)
 Frame = -3

Query: 243 SGVITACSGNLDMIRQLHCLALKGGHGSYCSVNNTLITYYSKIGILDEAKRIFYGMGEAK 64
           S VITAC  ++ +I QLH +A+  G  SY SVNN L+TYY K G LD+AKR+FYGMG  +
Sbjct: 144 SAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIR 203

Query: 63  DEVTWNSMIVAYGQNKE 13
           DEV+WNSMIVAYGQ++E
Sbjct: 204 DEVSWNSMIVAYGQHQE 220


>emb|CBI29560.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/77 (62%), Positives = 60/77 (77%)
 Frame = -3

Query: 243 SGVITACSGNLDMIRQLHCLALKGGHGSYCSVNNTLITYYSKIGILDEAKRIFYGMGEAK 64
           S VITAC  ++ +I QLH +A+  G  SY SVNN L+TYY K G LD+AKR+FYGMG  +
Sbjct: 144 SAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIR 203

Query: 63  DEVTWNSMIVAYGQNKE 13
           DEV+WNSMIVAYGQ++E
Sbjct: 204 DEVSWNSMIVAYGQHQE 220