BLASTX nr result

ID: Lithospermum22_contig00034530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034530
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520706.1| stromal antigen, putative [Ricinus communis]...    58   9e-07
ref|XP_002270509.2| PREDICTED: cohesin subunit SA-1-like [Vitis ...    56   3e-06
emb|CBI32283.3| unnamed protein product [Vitis vinifera]               56   3e-06
emb|CAN67841.1| hypothetical protein VITISV_016664 [Vitis vinifera]    56   3e-06

>ref|XP_002520706.1| stromal antigen, putative [Ricinus communis]
           gi|223540091|gb|EEF41668.1| stromal antigen, putative
           [Ricinus communis]
          Length = 1106

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/58 (46%), Positives = 36/58 (62%)
 Frame = -3

Query: 207 ISLAELWVWFTMSNFASKKLRSLGCPPDESSFRQVWGICKKQLQISDAPKYDDVISQY 34
           I LAE W  F  +NF+S KL SLGC PD S  ++ W +C++QL ISD    +D   +Y
Sbjct: 767 IILAEAWCLFRHTNFSSTKLESLGCCPDTSVVQKFWELCEQQLNISDETDDEDTNKEY 824


>ref|XP_002270509.2| PREDICTED: cohesin subunit SA-1-like [Vitis vinifera]
          Length = 1143

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/58 (44%), Positives = 37/58 (63%)
 Frame = -3

Query: 207 ISLAELWVWFTMSNFASKKLRSLGCPPDESSFRQVWGICKKQLQISDAPKYDDVISQY 34
           I LA++W  F  + F+S KL SLG  PD S  ++ W +C++QL ISD  + DDV  +Y
Sbjct: 779 IILAQVWCLFKKTKFSSTKLESLGYCPDSSVLQKFWKLCEQQLNISDETEEDDVNQEY 836


>emb|CBI32283.3| unnamed protein product [Vitis vinifera]
          Length = 1144

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/58 (44%), Positives = 37/58 (63%)
 Frame = -3

Query: 207 ISLAELWVWFTMSNFASKKLRSLGCPPDESSFRQVWGICKKQLQISDAPKYDDVISQY 34
           I LA++W  F  + F+S KL SLG  PD S  ++ W +C++QL ISD  + DDV  +Y
Sbjct: 780 IILAQVWCLFKKTKFSSTKLESLGYCPDSSVLQKFWKLCEQQLNISDETEEDDVNQEY 837


>emb|CAN67841.1| hypothetical protein VITISV_016664 [Vitis vinifera]
          Length = 1616

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/58 (44%), Positives = 37/58 (63%)
 Frame = -3

Query: 207  ISLAELWVWFTMSNFASKKLRSLGCPPDESSFRQVWGICKKQLQISDAPKYDDVISQY 34
            I LA++W  F  + F+S KL SLG  PD S  ++ W +C++QL ISD  + DDV  +Y
Sbjct: 1171 IILAQVWCLFKKTKFSSTKLESLGYCPDSSVLQKFWKLCEQQLNISDETEEDDVNQEY 1228


Top