BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00034487
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...   268   9e-70
ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...   244   1e-62
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]   244   1e-62
ref|XP_003545174.1| PREDICTED: pentatricopeptide repeat-containi...   233   4e-59
ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   229   5e-58

>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score =  268 bits (685), Expect = 9e-70
 Identities = 137/251 (54%), Positives = 182/251 (72%), Gaps = 4/251 (1%)
 Frame = +2

Query: 2   NISTNDIVSSFKAWFLARNDPFLEQIFHILRTREGFNLESSLSQLNLFVTERLVLQVLNY 181
           N +   +V SFK WF  +N+ FL+++F IL  ++  + E +LSQL L +TE LVL VL+Y
Sbjct: 69  NYTYKHVVQSFKEWFKTQNNGFLDRVFEILSNQDEVD-ELALSQLGLRLTESLVLDVLHY 127

Query: 182 RKNSPDVLSCLKFFDWAGRQKGFFHTRATFSAIFRILCKAKLMSIMLEFLETFLKQRQPM 361
             +  DVLSCLKFFDWAGRQ GF+HTRATF AIF+IL KAKLM +ML+FL+ ++K R   
Sbjct: 128 GNSKKDVLSCLKFFDWAGRQSGFYHTRATFHAIFKILSKAKLMQLMLDFLDNYMKHRFAN 187

Query: 362 VR----FYSTLVIGYSVAGKPETALQMFGRMRFQGIDLDSFGYNVLLNALVDEGHDDAFE 529
            +    FYSTL++GYSVAGKP+ ALQ+FG+MRF G DLD+F Y++LLN+LV+E   DA +
Sbjct: 188 HKLGYGFYSTLIMGYSVAGKPQVALQLFGKMRFLGRDLDAFAYHILLNSLVEECCFDAVD 247

Query: 530 MVVKQIRLRGLENPITHSIVTKSFCKKREFDKAEEYLRRLWGEGERLSGAGIAEFIDALC 709
            + KQI +RG E+ ITHSIV KSFCK+R  D+AE YLRR+  +GE  +GA +   + A C
Sbjct: 248 DIAKQISIRGFESHITHSIVVKSFCKQRMLDEAEAYLRRMILQGESGNGAAVGILVGAFC 307

Query: 710 QDRQFKRAANL 742
           Q  QF++A  L
Sbjct: 308 QKGQFEKAGQL 318


>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Vitis vinifera]
          Length = 881

 Score =  244 bits (624), Expect = 1e-62
 Identities = 132/251 (52%), Positives = 179/251 (71%), Gaps = 4/251 (1%)
 Frame = +2

Query: 2   NISTNDIVSSFKAWFLA-RNDPFLEQIFHILRTREGFNLESSLSQLNLFVTERLVLQVLN 178
           ++   D+V SFK WF + +N   ++QIF IL      + +++L +L L ++ER VL VL 
Sbjct: 57  SLQAKDVVLSFKQWFKSPQNILLMDQIFRILSDLPPDDADAALGRLRLPLSERFVLDVLA 116

Query: 179 YRKNSPDVLSCLKFFDWAGRQKGFFHTRATFSAIFRILCKAKLMSIMLEFLETFLKQRQP 358
           +     DVLSCLKFFDWAGRQ GF HTRATF A F+IL +AKLMS+ML+FL+ + + R  
Sbjct: 117 H---GSDVLSCLKFFDWAGRQPGFHHTRATFHATFKILARAKLMSLMLDFLQNYTELRYV 173

Query: 359 -MVRFYSTLVIGYSVAGKPETALQMFGRMRFQGIDLDSFGYNVLLNALVDEGHDDAFEMV 535
             VRFY TLV+GY+VAGKPE ALQ+F +MRFQG+DLDSF Y+VLLNALV+E   DAF +V
Sbjct: 174 HRVRFYDTLVMGYAVAGKPEIALQLFAKMRFQGLDLDSFAYHVLLNALVEENCFDAFRVV 233

Query: 536 VKQIRLRGLENPITHSIVTKSFCKKREFDKAEEYLRRLWGEGE-RLSGAG-IAEFIDALC 709
           V+QIR+RGL+N ITHSI+ K+FCK+ + D+A+ ++ +L   G   LSG   +   +DALC
Sbjct: 234 VEQIRMRGLDNEITHSIIVKNFCKQGQLDEAKAFVEQLVESGRVGLSGGHMVGLIVDALC 293

Query: 710 QDRQFKRAANL 742
           + ++F  A  L
Sbjct: 294 KRKRFGEAGRL 304


>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score =  244 bits (624), Expect = 1e-62
 Identities = 132/251 (52%), Positives = 179/251 (71%), Gaps = 4/251 (1%)
 Frame = +2

Query: 2   NISTNDIVSSFKAWFLA-RNDPFLEQIFHILRTREGFNLESSLSQLNLFVTERLVLQVLN 178
           ++   D+V SFK WF + +N   ++QIF IL      + +++L +L L ++ER VL VL 
Sbjct: 57  SLQAKDVVLSFKQWFKSPQNILLMDQIFRILSDLPPDDADAALGRLRLPLSERFVLDVLA 116

Query: 179 YRKNSPDVLSCLKFFDWAGRQKGFFHTRATFSAIFRILCKAKLMSIMLEFLETFLKQRQP 358
           +     DVLSCLKFFDWAGRQ GF HTRATF A F+IL +AKLMS+ML+FL+ + + R  
Sbjct: 117 H---GSDVLSCLKFFDWAGRQPGFHHTRATFHATFKILARAKLMSLMLDFLQNYTELRYV 173

Query: 359 -MVRFYSTLVIGYSVAGKPETALQMFGRMRFQGIDLDSFGYNVLLNALVDEGHDDAFEMV 535
             VRFY TLV+GY+VAGKPE ALQ+F +MRFQG+DLDSF Y+VLLNALV+E   DAF +V
Sbjct: 174 HRVRFYDTLVMGYAVAGKPEIALQLFAKMRFQGLDLDSFAYHVLLNALVEENCFDAFRVV 233

Query: 536 VKQIRLRGLENPITHSIVTKSFCKKREFDKAEEYLRRLWGEGE-RLSGAG-IAEFIDALC 709
           V+QIR+RGL+N ITHSI+ K+FCK+ + D+A+ ++ +L   G   LSG   +   +DALC
Sbjct: 234 VEQIRMRGLDNEITHSIIVKNFCKQGQLDEAKAFVEQLVESGRVGLSGGHMVGLIVDALC 293

Query: 710 QDRQFKRAANL 742
           + ++F  A  L
Sbjct: 294 KRKRFGEAGRL 304


>ref|XP_003545174.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Glycine max]
          Length = 868

 Score =  233 bits (593), Expect = 4e-59
 Identities = 121/253 (47%), Positives = 170/253 (67%), Gaps = 7/253 (2%)
 Frame = +2

Query: 5   ISTNDIVSSFKAWFLARN------DPFLEQIFHILRTREGFNLESSLSQLNLFVTERLVL 166
           IS ND+ SSFK WF +        DP L +I  IL + +  +  ++LS L L ++ERLVL
Sbjct: 48  ISQNDVASSFKTWFASARQQQLPFDPLLNRIHQILSSPDDEDFSAALSALRLPLSERLVL 107

Query: 167 QVLNYRKNSPDVLSCLKFFDWAGRQKGFFHTRATFSAIFRILCKAKLMSIMLEFLETFLK 346
           +VL +     D+L CLKFFDWAGRQ  F HTRATF +IF+IL +A L  ++LEFL+ F +
Sbjct: 108 RVLCHGAARRDILPCLKFFDWAGRQPHFHHTRATFVSIFKILARADLKPLVLEFLDAFRR 167

Query: 347 QR-QPMVRFYSTLVIGYSVAGKPETALQMFGRMRFQGIDLDSFGYNVLLNALVDEGHDDA 523
           +      RF+  LV+GY++AGKP+ AL  F RMRF G+DLDSF Y+VLL ALV++ + +A
Sbjct: 168 RIFHHRGRFHDILVVGYAIAGKPQNALHAFARMRFHGLDLDSFAYHVLLEALVEKNYLNA 227

Query: 524 FEMVVKQIRLRGLENPITHSIVTKSFCKKREFDKAEEYLRRLWGEGERLSGAGIAEFIDA 703
           F+++++QIR RG EN +T+ IV K  CK+R  ++AE++L  L   GE L G  ++  IDA
Sbjct: 228 FDIIMRQIRARGYENHMTNVIVVKHLCKERRLEEAEDFLNGLMCRGEELKGPEVSFLIDA 287

Query: 704 LCQDRQFKRAANL 742
           LC+  +F+RA  L
Sbjct: 288 LCESYRFERAVEL 300


>ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71210-like, partial [Cucumis sativus]
          Length = 889

 Score =  229 bits (584), Expect = 5e-58
 Identities = 124/253 (49%), Positives = 170/253 (67%), Gaps = 9/253 (3%)
 Frame = +2

Query: 11  TNDIVSSFKAWFLARNDPFLEQIFHILR-TREGFNL-------ESSLSQLNLFVTERLVL 166
           T ++ SSFK WF + ++P   +IF ILR  R+   +       + +LS+L L + E  VL
Sbjct: 54  TKEVASSFKEWFKSGSNPLYGKIFQILRGARDDQEIPYRPSAADLALSRLGLRLNESFVL 113

Query: 167 QVLNYRKNSPDVLSCLKFFDWAGRQKGFFHTRATFSAIFRILCKAKLMSIMLEFLETFLK 346
            VL +   S DVLSCLKFFDWAGRQ+ FFHTRATF+AI +IL KAKL+S+M +FLE  ++
Sbjct: 114 DVLRF--GSKDVLSCLKFFDWAGRQERFFHTRATFNAILKILSKAKLVSLMFDFLENCVQ 171

Query: 347 QR-QPMVRFYSTLVIGYSVAGKPETALQMFGRMRFQGIDLDSFGYNVLLNALVDEGHDDA 523
            +   M  FY+ LV+GY+ AGKP  AL +FG+MRFQG+DLD F Y+VLLN+LV+E   DA
Sbjct: 172 HKLYHMPCFYNILVMGYAAAGKPIFALHLFGKMRFQGLDLDPFSYHVLLNSLVEENCFDA 231

Query: 524 FEMVVKQIRLRGLENPITHSIVTKSFCKKREFDKAEEYLRRLWGEGERLSGAGIAEFIDA 703
             +++KQI LRG  N ITH ++ KSFCK+ + D+AE +L  L   G++L+G  +   + A
Sbjct: 232 VNVIIKQITLRGFVNEITHYLMLKSFCKQNQLDEAETFLHDLVDSGKKLNGRMLDLLVGA 291

Query: 704 LCQDRQFKRAANL 742
            CQ   F+RA  L
Sbjct: 292 FCQSGNFERAWKL 304